Pairwise Alignments

Query, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., D-alanyl-D-alanine carboxypeptidase from Rhodopseudomonas palustris CGA009

 Score =  204 bits (518), Expect = 5e-57
 Identities = 129/387 (33%), Positives = 202/387 (52%), Gaps = 8/387 (2%)

Query: 2   KKSILKSVLASSITLSITLSSTAFASPIVT-----PDAPQIAAKGYVLMDYHSGKVLAEK 56
           + S+ + +LA  I +++       A+  V          +  A   +L+D  SG VL EK
Sbjct: 11  RSSLWRGLLAGLIAVAVGAGPVTAANQSVQGAKKDDSGFEAQAPSAILVDAESGSVLFEK 70

Query: 57  EMDTKLSPASLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWAKNFPDS--SKMFVEVGT 114
             D   +P+S+ K+MT   +   +K G++ L  +  +S+NAW      +  S MF E+ +
Sbjct: 71  NADELRAPSSMMKLMTVETVFHLLKTGDLQLTQEYRVSENAWRNGGAPAGGSTMFAEIHS 130

Query: 115 TVKVSDLNRGIIIQSGNDACVAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLDD 174
            + V +L  G IIQSGND+C+ +AE +AG+E AFV+ M   A ++G+  S F NS GL +
Sbjct: 131 IISVDNLLHGAIIQSGNDSCMVLAEGIAGSEAAFVEQMTKRARAIGLTQSTFANSTGLPN 190

Query: 175 PNLYSTPYDLALLGQALIRDVPEEYAIYSEQKFTYNGITQYNRNGLLWDKSMNVDGIKTG 234
           P+   +  +LA L + +I   PE Y ++ E++FT+N I Q NRN LL +     DG KTG
Sbjct: 191 PDNKMSVRELAKLARHIILTYPEYYPLFGEKEFTWNKIRQTNRNPLL-NAMPGADGFKTG 249

Query: 235 HTSGAGYNLVSSATEGNMRLVAVVMGTDNENARKAESKKLLSYGFRFFETVAPHKAGETF 294
           +T   GY +V SA +  MRL+ VV G D+ + R +E+KKLL +GFR FE+ +      T 
Sbjct: 250 YTKEGGYGMVGSAVQNGMRLIVVVNGLDDADDRASEAKKLLEWGFRNFESRSLFANDATI 309

Query: 295 VNETIWMGDKDTIALGVDKDTYVTLPRGQAKDLTASFVLEKQLKAPLKKGDIVGTLYYQL 354
               ++ G+K  + L   +   V + +  +  L A  V +  + AP++ G  VG +    
Sbjct: 310 GYARVFGGEKRYVPLTPAEPVRVMVRKNGSDKLIARIVYQGPVPAPVESGQRVGMVRVWR 369

Query: 355 AGNDIAQYPLLALEDVQEGSLFSRLWD 381
             N   + PL A E    G    R  D
Sbjct: 370 GPNLAVEVPLKAAEADPVGPTMRRALD 396