Pairwise Alignments

Query, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 405 a.a., Probable penicillin-binding protein DacB1 (D-alanyl-D-alanine carboxypeptidase) (DD-peptidase) (DD-carboxypeptidase) (PBP) (DD-transpeptidase) (serine-type D-ala-D-ala carboxypeptidase) (D-amino acid hydrolase) from Mycobacterium tuberculosis H37Rv

 Score = 84.7 bits (208), Expect = 4e-21
 Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 18/260 (6%)

Query: 27  SPIVTPDAPQIAAKGYVLMDYHSGKVLAEKEMDTKLSPASLTKMMTSYVIGQEVKRGNIS 86
           +P   P    ++A+ +++ D  SG V+A ++   +  PAS+ K++ +           ++
Sbjct: 82  APGSAPAPGDVSAEAWLVADLDSGAVIAARDPHGRHRPASVIKVLVAMA-----SINTLT 136

Query: 87  LNDDVVISKNAWAKNFPDSSKMFVEVGTTVKVSDLNRGIIIQSGNDACVAMAEHVAGTED 146
           LN  V  + +  A    + +K+ V  G T  V+ L  G+++ SGNDA  A+A  + G   
Sbjct: 137 LNKSVAGTADDAAV---EGTKVGVNTGGTYTVNQLLHGLLMHSGNDAAYALARQLGGMPA 193

Query: 147 AFVDLMNAWASSLGMKNSHFTNSHGLDDPNLYSTPYDLALLGQALIRDVPEEYAIYSEQK 206
           A ++ +N  A+ LG +++      GLD P + ++ YD+ L  +   ++ P    I + + 
Sbjct: 194 A-LEKINLLAAKLGGRDTRVATPSGLDGPGMSTSAYDIGLFYRYAWQN-PVFADIVATRT 251

Query: 207 FTYNGITQY------NRNGLLWDKSMNVDGIKTGHTSGAGYNLVSSATEGNMRLVAVVM- 259
           F + G   +      N N LL++    + G KTG+T  AG   V +A     RL+ V++ 
Sbjct: 252 FDFPGHGDHPGYELENDNQLLYNYPGALGG-KTGYTDDAGQTFVGAANRDGRRLMTVLLH 310

Query: 260 GTDNENARKAESKKLLSYGF 279
           GT        ++  LL YGF
Sbjct: 311 GTRQPIPPWEQAAHLLDYGF 330