Pairwise Alignments

Query, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., Probable penicillin-binding protein DacB2 (D-alanyl-D-alanine carboxypeptidase) (DD-peptidase) (DD-carboxypeptidase) (PBP) (DD-transpeptidase) (serine-type D-ala-D-ala carboxypeptidase) (D-amino acid hydrolase) from Mycobacterium tuberculosis H37Rv

 Score = 80.5 bits (197), Expect = 6e-20
 Identities = 72/239 (30%), Positives = 114/239 (47%), Gaps = 18/239 (7%)

Query: 26  ASPIVTPDAPQIAAKGYVLMDYHSGKVLAEKEMDTKLSPASLTKMMTSYVIGQEVKRGNI 85
           A  +  PD P   A+ +++ D  SG+VLA ++ +    PAS  K++ + V   E     +
Sbjct: 32  AGSVPIPDGP---AQTWIVADLDSGQVLAGRDQNVAHPPASTIKVLLALVALDE-----L 83

Query: 86  SLNDDVVISKNAWAKNFPDSSKMFVEVGTTVKVSDLNRGIIIQSGNDACVAMAEHVAGTE 145
            LN  VV      A    + + + V+ G +     L  G+++ SGNDA   +A H+ G +
Sbjct: 84  DLNSTVVADV---ADTQAECNCVGVKPGRSYTARQLLDGLLLVSGNDAANTLA-HMLGGQ 139

Query: 146 DAFVDLMNAWASSLGMKNSHFTNSHGLDDP--NLYSTPYDLALLGQALIRDVPEEYAIYS 203
           D  V  MNA A++LG  ++H T   GLD P  +  ST +DL ++ +A + + P    I +
Sbjct: 140 DVTVAKMNAKAATLGATSTHATTPSGLDGPGGSGASTAHDLVVIFRAAMAN-PVFAQITA 198

Query: 204 EQKFTY---NGITQYNRNGLLWDKSMNVDGIKTGHTSGAGYNLVSSATEGNMRLVAVVM 259
           E    +   NG         L  +     G KTG+T+ A    V +A  G  RLV  +M
Sbjct: 199 EPSAMFPSDNGEQLIVNQDELLQRYPGAIGGKTGYTNAARKTFVGAAARGGRRLVIAMM 257