Pairwise Alignments

Query, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  197 bits (500), Expect = 6e-55
 Identities = 125/384 (32%), Positives = 205/384 (53%), Gaps = 15/384 (3%)

Query: 9   VLASSITLSITLSSTAFASPIVTPDAPQIAAKGYVLMDYHSGKVLAEKEMDTKLSPASLT 68
           ++  S+ L + L+  A A       A +  A+   ++D  +G VL EK  D  L PAS++
Sbjct: 6   LICLSLALGLGLAPAAQA-------AFETRAEAAYVVDVTTGTVLLEKNADVPLPPASMS 58

Query: 69  KMMTSYVIGQEVKRGN-ISLNDDVVISKNAWAKNFPDSSKMFVEVGTTVKVSDLNRGIII 127
           K+MT Y++ + +++   ++L+    +S  A AK     S MF+         DL +GII+
Sbjct: 59  KLMTLYMLFEALEKNPAVTLDTTFRVSARAMAKG---GSTMFLTERDRPTAEDLIKGIIV 115

Query: 128 QSGNDACVAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLDDPNLYSTPYDLALL 187
           QSGNDA V +AE +AGTE+AF  LM    +++G+  S FTNS G  DP    +  DL +L
Sbjct: 116 QSGNDATVVVAEGLAGTEEAFSRLMTEKGAAIGLTQSTFTNSSGWPDPQHRMSMRDLGIL 175

Query: 188 GQALIRDVPEEYAIYSEQKFTYNGIT---QYNRNGLLWDKSMNVDGIKTGHTSGAGYNLV 244
            Q +I D PE Y  ++  ++ ++G     ++NRN LL    +  DG+KTGHT  AGY LV
Sbjct: 176 TQRIIEDYPEYYGYFAMSEWGFDGRAPQNRFNRNPLL-KLDIGADGLKTGHTQEAGYGLV 234

Query: 245 SSATEGNMRLVAVVMGTDNENARKAESKKLLSYGFRFFETVAPHKAGETFVNETIWMGDK 304
            SA +G  R++ V+ G + + AR  ES++++S+ FR F      +AG    +  +W+G+ 
Sbjct: 235 GSAQQGARRIIFVITGLETDRARAEESERIVSWAFRQFVEKDMAEAGRHLADLPVWVGEA 294

Query: 305 DTIALGVDKDTYVTLPRGQAKDLTASFVLEKQLKAPLKKGDIVGTLYYQLAGNDIAQYPL 364
           +T+ L   +D    +P   +  L A    +  + AP+  G  +  L       +  +YPL
Sbjct: 295 ETVGLVSPEDIRPLVPMVASGSLVAEIEADTPIAAPITAGQQLAELVITGPEMEPQRYPL 354

Query: 365 LALEDVQEGSLFSRLWDYLVLLFK 388
           +A  DV +G  + R+     +L++
Sbjct: 355 VAETDVAKGGAWVRMQAAAEVLYR 378