Pairwise Alignments

Query, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., cytochrome C550 from Burkholderia phytofirmans PsJN

 Score =  286 bits (733), Expect = 6e-82
 Identities = 159/392 (40%), Positives = 237/392 (60%), Gaps = 10/392 (2%)

Query: 4   SILKSVLASSITLSITLSSTAFASPIVTP-DAPQIAAKGYVLMDYHSGKVLAEKEMDTKL 62
           S + S L+ ++TL + L +T  AS        P + A+ +VL+D  S +VLA    D ++
Sbjct: 16  SFVPSTLSRAVTLGVVLPATLVASTAFAQVPPPAVNARSWVLVDATSNQVLASGNPDERV 75

Query: 63  SPASLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWAKNFPDSSKMFVEVGTTVKVSDLN 122
            PASLTK+MT+Y++ + ++   I++ D  V+   A  +   D S+MF+E    V V DL 
Sbjct: 76  EPASLTKLMTAYLVFEALQTKKINM-DQTVMPSEAVRRVRTDESRMFIEANKPVTVHDLV 134

Query: 123 RGIIIQSGNDACVAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLDDPNLYSTPY 182
            G+IIQSGNDA +A+AE V G+E  FV++MN  A  LGMKN+HF + +G+ DP  Y+T  
Sbjct: 135 YGMIIQSGNDAAIALAELVGGSESQFVNMMNNEAQKLGMKNTHFADVNGMPDPQHYTTAG 194

Query: 183 DLALLGQALIRDVPEEYAIYSEQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSGAGYN 242
           DLA+L   LIRD P+ Y I+S ++FTYN I Q NRN LLW     VDG+KTGHT  AGY 
Sbjct: 195 DLAVLSARLIRDFPDYYNIFSVKEFTYNKIKQPNRNRLLW-IDPTVDGLKTGHTQAAGYC 253

Query: 243 LVSS-------ATEGNMRLVAVVMGTDNENARKAESKKLLSYGFRFFETVAPHKAGETFV 295
           L++S       AT+ + RLV+V+MG   E+ R  +S K+L+YG+  ++TV  +KA +   
Sbjct: 254 LIASAKRSLPGATDASRRLVSVMMGETKEHDRVQDSLKMLNYGYSAYDTVRLYKANQVVG 313

Query: 296 NETIWMGDKDTIALGVDKDTYVTLPRGQAKDLTASFVLEKQLKAPLKKGDIVGTLYYQLA 355
              ++ G +DT+ +GV  D Y+T+P+G    +         L AP+  G  VGT      
Sbjct: 314 TPRVYKGAQDTVQIGVKSDQYITVPKGMGDKVKPQIEQIDPLIAPIANGQQVGTAKLVAD 373

Query: 356 GNDIAQYPLLALEDVQEGSLFSRLWDYLVLLF 387
           G  +AQ+P++AL+ V +  +  R+WD L+L+F
Sbjct: 374 GKVLAQFPIVALQAVPQAGVVGRVWDSLMLMF 405