Pairwise Alignments

Query, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., D-alanyl-D-alanine endopeptidase (RefSeq) from Shewanella sp. ANA-3

 Score = 80.5 bits (197), Expect = 6e-20
 Identities = 72/276 (26%), Positives = 130/276 (47%), Gaps = 23/276 (8%)

Query: 12  SSITLSITLSSTAFASPIVTPDAPQIAAKGYVLMDYHSGKVLAEKEMDTKLSPASLTKMM 71
           S+ + S+T  STA A         ++AA   +++D  + ++L     D     AS+TK+M
Sbjct: 25  SADSASVTTKSTATAKKAPVKQQ-EVAANSALVVDLKTNEILYSSNPDAVRPIASVTKLM 83

Query: 72  TSYVIGQEVKRGNISLNDDVVISKNAWAKNFPDSSKMFVEVGTTVKVSDLNRGIIIQSGN 131
           T+ V         + +++ + I+ N   +     S+  V +G+ +   D+    ++ S N
Sbjct: 84  TAMV----TLDAKLPMDEKLAININDTKEMRGVYSR--VRIGSEISRKDMLLLTLMSSEN 137

Query: 132 DACVAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLDDPNLYSTPYDLALLGQAL 191
            A  ++A H  G   AF+  MNA A +LGMKN+ +    GL + N+ S+  DL +L +A 
Sbjct: 138 RAAASLAHHYPGGHKAFIKAMNAKAKALGMKNTRYVEPTGLSEKNV-SSARDLVVLLKA- 195

Query: 192 IRDVPEEYAIY-----SEQKFTYNGITQY-----NRNGLLWDKSMNVDGIKTGHTSGAGY 241
                E Y +      +E+K    G  +Y     N N L++  + N+   KTG T+ AG+
Sbjct: 196 ----SEGYPMLGQLSSTEKKTVTFGKPKYSLDFRNTNRLVYKDNWNIHLTKTGFTNEAGH 251

Query: 242 NLVSSATEGNMRLVAVVMGTDNENARKAESKKLLSY 277
            LV        ++  VV+    +    A++ +L ++
Sbjct: 252 CLVMRTEMAKRQVAFVVLDAYGKYTHMADANRLRNW 287