Pairwise Alignments

Query, 737 a.a., chain-length determining protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., polysaccharide transporter from Sinorhizobium meliloti 1021

 Score =  171 bits (433), Expect = 1e-46
 Identities = 160/654 (24%), Positives = 284/654 (43%), Gaps = 72/654 (11%)

Query: 1   MTGKQFTQEEVIDIRQYFNVLLNYKWRILLFSVMVTAITLLFVLSMRSEYTARATILIES 60
           M+G    Q+  ID+   F  +   + R+LL +V   A+       +  +Y     +LIES
Sbjct: 1   MSGIGGQQDVDIDLGGLFRAIWQRRVRVLLATVGAGAVAFGAAKMVAPDYEGETRVLIES 60

Query: 61  TQAKAVSIEEVY--GLDTKSQEY-YLTQIEILKSDTIAQEVIERLDLASDPEFDLSPESD 117
            + +     +V   G D    E   L+Q+++L+S  + ++V   + L    EFD S    
Sbjct: 61  REPEFSGANQVSQNGSDRMFDESGILSQVQVLRSADLIKQVARNMKLHELDEFDPSARPS 120

Query: 118 ASPSLKERLVEWMPFLQGFKQEETVADPDLEAYRQNRLILYKFKRGMEISPIRKTQLVNI 177
           A+  L   L        G K+      P+         +L +F+  +++  + K++++ I
Sbjct: 121 AASDLLVML--------GLKKNPLDLPPE-------ERVLKEFEEKLQVYQVEKSRVIAI 165

Query: 178 YYTAGDPKLAAKIANEIARVYMDSHLEAKLEVELKANTWLNTRMEELRTQLRESEAKLQA 237
            +T+ D  LAA I NE+A VY+     AKL+   +A+ WL   +  LR ++RE+EAK+  
Sbjct: 166 AFTSKDATLAAAIPNEMANVYLSLQSGAKLDSNSEASRWLEPEIANLREKVREAEAKVAL 225

Query: 238 FLQAEGLVDVQGVEGLATQELEELTSQMNKARDRRVAAETLYQVANSYSKNDSDLTALS- 296
           +    GL+     +  AT++L ++++++ + R  R         AN+ ++ +   TAL+ 
Sbjct: 226 YRAESGLLPAGETQNFATRQLTDISTELARVRSER---------ANTAARAEGMRTALAD 276

Query: 297 -----SIPEISNHPTIRDLKVAEVDAERKVSEFSKRYGPKHPKLKSASAQLEAVRKNLRA 351
                ++ +I   P I+ LK    + + ++++ S      HP+LK   +QLE +   +R+
Sbjct: 277 GRPADTLADIVGSPMIQRLKENHANVQAQIADLSTALLDGHPRLKGLKSQLEGIEGAIRS 336

Query: 352 ELRQLLNGINNELQAAKQSERSLQTEFNQRKSEFQTLTVKNAKYSELKREVQTNRELFDL 411
           E R++L  + NE +  +  E+ L  + N  K++      +      L+RE    R+L + 
Sbjct: 337 ETRKILASLENEAKVGQLREQQLVQQMNTLKAQSAQAGEEEVGLRALEREATAQRQLLET 396

Query: 412 FLARQKETSASGDFNTT--IARFTDQASAPLTPSKPNKKLIVLLAFVVSFGFACVVAFIA 469
           +LAR +E ++    N T   AR   +A  P + S P    I ++A   S  F+CVV  + 
Sbjct: 397 YLARYREATSRTVANATPADARVISRAVVPTSQSFPKVLPITIVAAFASLLFSCVVIMLG 456

Query: 470 DAMTDTF---------------ADIKQ----VEKQLALSLLGVVPVVRKQRGKLDAKAYF 510
           +  +                  A++      VE+  A  L    P   +     +A +  
Sbjct: 457 ELFSGRALRPVSVPEAPAPGQPAEMPSVPGAVEENPASVLAAADPAPEENGDDGNAASKH 516

Query: 511 DEKLRELTEAVRTIRTSYLLAHVNQDQHVVMLTSCLPG--EGKTTSSLNLALSLAQMEKT 568
           D  +  + E +R                V +  S  PG  EG T + +   L     +K 
Sbjct: 517 DFSIESVAEHLRA-------------NGVRIAVSVSPGGDEGSTATVMLARLLAEDGQKV 563

Query: 569 LLIDCDLRKPAIAHR-FGISGSQPGVTNLLNGTQSLEDCVYHDEQSGLDILTAG 621
           +LI  DL   A   R    S    GVTNLL G  +    ++ D  S   I+  G
Sbjct: 564 VLI--DLSGSACPTRLMAQSRDLAGVTNLLMGEVAFSGSIHSDRLSEAHIIPHG 615