Pairwise Alignments

Query, 737 a.a., chain-length determining protein from Vibrio cholerae E7946 ATCC 55056

Subject, 812 a.a., putative tyrosine-protein kinase in cps region (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  152 bits (384), Expect = 7e-41
 Identities = 136/588 (23%), Positives = 259/588 (44%), Gaps = 38/588 (6%)

Query: 162 RGMEISPIRKTQLVNIYYTAGDP-KLAAKIANEIARVYMDSHLEAKLEVELKANTWLNTR 220
           + + I+P  KT  V +        +      N++  +Y  +    K E+  K   +++ R
Sbjct: 237 KNLSIAPTSKTTSVAVISLKNSSLQRGQDFINQLLEMYNRNTNNDKNEIAQKTAEFIDER 296

Query: 221 MEELRTQLRESEAKLQAFLQAEGLVDV--QGVEGLATQELEELTSQMNKARDRRVAAETL 278
           +  +  +L  +EA L++F +  G+ D+  +    LA     E  S  N+ +   V     
Sbjct: 297 IGIISKELGSTEANLESFKRDAGITDLTSEAQIALAGNAEYEKKSVENRTQISLVNDLRK 356

Query: 279 YQVANSYSKNDSDL----TALSSIPEISNHPTIRDLKVAEVDAERKVSEFSKRYGPKHPK 334
           Y   N Y    S++     AL    E  N   I   ++     E             +P 
Sbjct: 357 YLRGNEYEVLPSNVGLQDAALIGAIERYNEMLIERKRLLRTSTEN------------NPT 404

Query: 335 LKSASAQLEAVRKNLRAELRQLLNGINNELQAAKQSERSLQTEFNQRKSEFQTLTVKNAK 394
           + +    + A++ N++A L   L G+         ++ SL  E ++          +   
Sbjct: 405 IVNLDTSIRAMKANVQATLEGTLQGL-------MITKESLDREASRYSRRISNAPGQERA 457

Query: 395 YSELKREVQTNRELFDLFLARQKETSASGDFNTTIARFTDQASAPLTPSKPNKKLIVLLA 454
           Y  + R+ +    L+ + L +++E + +       A+  D+A A   P  P + +I L+A
Sbjct: 458 YVSIARQQEIKAGLYLMLLQKREENAIALAATANNAKIIDEAIADDIPVSPKRSMIYLIA 517

Query: 455 FVVSFGFACVVAFIADAMTDTFADIKQVEKQLALSLLGVVPVVRKQRGKLDAKAYFDEKL 514
            ++  G    + ++ +           VEK  ++ ++G +P+  ++  K  + A F+ K 
Sbjct: 518 LMLGVGIPVGIIYLIELTKFKIEGRADVEKLTSVPVVGDIPLTDEKNDKNGSIAVFENKN 577

Query: 515 RELTEAVRTIRTSYLLAHVNQDQHVVMLTSCLPGEGKTTSSLNLALSLAQM-EKTLLIDC 573
             ++E  R IRT+ L   ++ DQ V+++TS + GEGK+  S NLA+SL+ + +K +++  
Sbjct: 578 NLMSETFRNIRTN-LQFMLDNDQKVILVTSTVSGEGKSFVSSNLAISLSLLGKKVVIVGL 636

Query: 574 DLRKPAIAHRFGISGSQPGVTNLLNG--TQSLEDCVYHDEQSGLDILTAGVYASNPLELL 631
           D+RKP +   F +S  + G+T  L+   T  +E     D    L IL  G    NP ELL
Sbjct: 637 DIRKPGLNKVFQLSNKERGITQYLSNPETDLMELVQPSDVNKNLFILPGGTVPPNPTELL 696

Query: 632 SSSKFSELLADLRTRYQRIVIDTPPCLAVSDSFMLAQYVDSVILVIDANHTRT---PVVR 688
           + +     +  L+  +  +++DT P   V+D+ ++ +  D  + V  A++T      ++ 
Sbjct: 697 ARNGLDRAIETLKKNFDYVILDTAPIGMVTDTLLIGRVADLSVYVCRADYTHKAEYTLIN 756

Query: 689 EV--VGKLTQQGSRIDGVILNRLNAKKASRYSGYYHYQAYYGEETKSG 734
           E+    KL    + I+GV L +   +K   Y GY  Y  +YG   + G
Sbjct: 757 ELSFEKKLPNLCTVINGVDLKK---RKYGYYYGYGKYGKHYGYGKRYG 801



 Score = 28.1 bits (61), Expect = 0.002
 Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 10/104 (9%)

Query: 9   EEVIDIRQY-FNVLLNYKWRILLFSVMVTAITLLFVLSMRSE-YTARATILIESTQ---- 62
           E+ ID R   F  ++++ W   + +V++  +   F L   +  Y   AT+LI+  +    
Sbjct: 15  EDQIDFRALLFKYIIHWPW--FVGAVLLCFVGAWFYLHWATPIYNISATVLIKDEKKGGG 72

Query: 63  AKAVSIEEVYGLD--TKSQEYYLTQIEILKSDTIAQEVIERLDL 104
           A   S  E  GL     S +    ++E+L+S T+ +EV+ +L L
Sbjct: 73  AGLSSELEDMGLSGVMTSSKNIDNELEVLRSKTLVKEVVNQLGL 116