Pairwise Alignments

Query, 737 a.a., chain-length determining protein from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., putative tyrosine-protein kinase in capsular polysaccharide biosynthesis region (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  138 bits (348), Expect = 5e-37
 Identities = 102/411 (24%), Positives = 196/411 (47%), Gaps = 19/411 (4%)

Query: 332 HPKLKSASAQLEAVRKNLRAELRQLLNGINNELQAAKQSERSLQTEFNQRKSEFQTLTVK 391
           +P + +    + A++ N++A L   L G+         ++ SL  E ++          +
Sbjct: 16  NPAIVNLDTSIRAMKANVQATLEGTLQGL-------MITKESLDREASRYSRRISNAPGQ 68

Query: 392 NAKYSELKREVQTNRELFDLFLARQKETSASGDFNTTIARFTDQASAPLTPSKPNKKLIV 451
              Y  + R+ +    L+ + L +++E + +       A+  D+A A   P  P + +I 
Sbjct: 69  ERAYVSIARQQEIKAGLYLMLLQKREENAIALAAPANNAKIIDEAIADDIPVSPKRSMIY 128

Query: 452 LLAFVVSFGFACVVAFIADAMTDTFADIKQVEKQLALSLLGVVPVVRKQRGKLDAKAYFD 511
           L+A ++  G    + ++ +           VEK  ++ ++G +P+  ++  K  + A F+
Sbjct: 129 LIALMLGVGIPVGIIYLIELTKFKIEGRADVEKLTSVPVVGDIPLTDEKNDKNGSIAVFE 188

Query: 512 EKLRELTEAVRTIRTSYLLAHVNQDQHVVMLTSCLPGEGKTTSSLNLALSLAQM-EKTLL 570
            K   ++E  R IRT+ L   ++ DQ V+++TS + GEGK+  S NLA+SL+ + +K ++
Sbjct: 189 NKNNLMSETFRNIRTN-LQFMLDNDQKVILVTSTVSGEGKSFVSSNLAISLSLLGKKVVI 247

Query: 571 IDCDLRKPAIAHRFGISGSQPGVTNLLNG--TQSLEDCVYHDEQSGLDILTAGVYASNPL 628
           +  D+RKP +   F +S  + G+T  L+   T  +E     D    L IL  G    NP 
Sbjct: 248 VGLDIRKPGLNKVFQLSNKERGITQYLSNPETDLMELVQPSDVNKNLFILPGGTVPPNPT 307

Query: 629 ELLSSSKFSELLADLRTRYQRIVIDTPPCLAVSDSFMLAQYVDSVILVIDANHTRT---P 685
           ELL+ +     +  L+  +  +++DT P   V+D+ ++ +  D  + V  A++T      
Sbjct: 308 ELLARNGLDRAIETLKKNFDYVILDTAPIGMVTDTLLIGRVADLSVYVCRADYTHKAEYT 367

Query: 686 VVREV--VGKLTQQGSRIDGVILNRLNAKKASRYSGYYHYQAYYGEETKSG 734
           ++ E+    KL    + I+GV L +   +K   Y GY  Y  +YG   + G
Sbjct: 368 LINELSFEKKLPNLCTVINGVDLKK---RKYGYYYGYGKYGKHYGYGKRYG 415