Pairwise Alignments

Query, 737 a.a., chain-length determining protein from Vibrio cholerae E7946 ATCC 55056

Subject, 740 a.a., sugar transporter from Burkholderia phytofirmans PsJN

 Score =  145 bits (365), Expect = 9e-39
 Identities = 177/769 (23%), Positives = 323/769 (42%), Gaps = 86/769 (11%)

Query: 5   QFTQEE-VIDIRQYFNVLLNYKWRILLFSVMVTAITLLFVLSMRSEYTARATILIE--ST 61
           QF+++E  IDIR   +V+   K  I+  +++ T I +++       Y    T+ +E  S 
Sbjct: 4   QFSRDEDEIDIRALIDVIFKNKKLIIAVTIVCTLIGVMYAFLATPIYRGDITVQVEDNSD 63

Query: 62  QAKAVSIEEVYGL----DTKSQEYYLTQIEILKSDTIAQEVIERLDLASDPEFDLSPESD 117
            A A +   + GL    D KS +    +++IL S  +   +++ L L  D          
Sbjct: 64  LAGAAAGNLMSGLTSLFDIKSTDD--GEMQILDSRLVTANMVDELRLYID---------- 111

Query: 118 ASPSLKERLVEWMPFLQGF--KQEETVADPDL-----EAYRQNRLILYKFK--RGMEISP 168
           A P       ++ P L  F  K   +++ P +      A+    +++ +F      E   
Sbjct: 112 ARP-------KYFPLLGAFIAKHRTSLSQPGILGVGGYAWGSESIVVDQFDVPGEFEEDK 164

Query: 169 IRKTQLVNIYYTAGDPKLAAKIANEIARVYMDSHLEAKLEVELKANTWLNTRMEELR--T 226
              T L N  Y      L A +   +    + +     +++ +   +       ELR  +
Sbjct: 165 FSVTTLGNNRYRLSGSDLNADVVGVVGVPLLANTSSGPIKLLVSRLSSRENAQFELRRFS 224

Query: 227 QLRESEAKLQAFLQAEGLVDVQGVEGLATQELEELTSQMNKARDRRVAAETLYQVANSYS 286
           +++  E   +  +  E   D  GV G+   +           +D   AA  L ++A +Y 
Sbjct: 225 RIQVLEQLRKDLVITEMGKDQSGVIGVTYDD-----------QDPARAAAVLNKIAENYV 273

Query: 287 KNDSDLTAL----------SSIPEISNHPTIRDLKVAEVDAERKV---SEFSKRYGPKHP 333
             ++D  A           S +P++     + + ++       KV   SE +K    +  
Sbjct: 274 AQNADRKAAAAEKSLVFLKSQLPDVERSLRLAEDRLNAYQNRHKVVDLSEQAKAVLGQAV 333

Query: 334 KLKSASAQLEAVRKNLRAELRQLLNGINNELQAAKQSERSLQTEFNQRKSEFQTLTVKNA 393
           + +S+  QLE  RK    EL  + +     + A  Q   + +   +      Q L     
Sbjct: 334 EAQSSLFQLEQKRK----ELATIYSAQYPAVLALDQQIAAARAHIDNFNESIQRLPDDQQ 389

Query: 394 KYSELKREVQTNRELFDLFLARQKETSASGDFNTTIARFTDQASAPLTPSKPNKKLIVLL 453
               L R+V     L+   L   ++   +        R  D A     P+KP K L++ L
Sbjct: 390 NIVRLNRDVTVQTSLYVGLLNSVQQLQLATASKIGNVRVIDHALVADKPTKPKKALVIAL 449

Query: 454 AFVVSF----GFACVVAFIADAMTDTFADIKQVEKQLALSLLGVVPV---------VRKQ 500
           A V+      GFA   + +   +TD       +E+ L+L ++  +P+         VR++
Sbjct: 450 AAVIGLFGGIGFALARSTLFGGLTDPM----DIERDLSLDVIATIPLSDTQRQLTRVRER 505

Query: 501 RGKLDAKAYFDEKLRE-LTEAVRTIRTSYLLAHV-NQDQHVVMLTSCLPGEGKTTSSLNL 558
            G+         + +E   EA+R++ T+   A + N   +V+++T    G GK+ +S NL
Sbjct: 506 GGRRGPSILALARPQEPAVEAIRSLCTALQFALLENPKNNVILMTGPSVGIGKSFTSANL 565

Query: 559 ALSLAQMEK-TLLIDCDLRKPAIAHRFGISGSQPGVTNLLNGTQSLEDCVYHDEQSGLDI 617
           A  L   +K  LL+D DLR+  +A  F +SG + G++N+L     LE  +  D    +D 
Sbjct: 566 AALLGMSKKRVLLMDVDLRRGHLAAEFDVSG-KVGLSNVLRDDMPLEAAIIKDVSPNVDF 624

Query: 618 LTAGVYASNPLELLSSSKFSELLADLRTRYQRIVIDTPPCLAVSDSFMLAQYVDSVILVI 677
           L  G   + P+ELLSS   +++LAD+  RY  +++D PP L V+D+ + A +   V+L  
Sbjct: 625 LATGPLMAQPVELLSSGGIAKILADVSGRYDIVLLDAPPVLPVTDATVFAPFAGIVLLAA 684

Query: 678 DANHTRTPVVREVVGKLTQQGSRIDGVILNRLNAKKASRYSGYYHYQAY 726
            +  T +  + E   ++ + G++I G++ N       S   G Y   AY
Sbjct: 685 RSGMTSSGELLESAKRIERVGAKITGIVFNGFKPSLRSAQYGDYGGYAY 733