Pairwise Alignments

Query, 175 a.a., polysaccharide biosynthesis/export family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., Polysaccharide export protein (NCBI) from Rhodospirillum rubrum S1H

 Score = 40.8 bits (94), Expect = 2e-08
 Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 3/113 (2%)

Query: 26  YRLGVGDQIRIQVYDEPELSFETRVSDNGNIDYPFLGRIRLKGKTLEEVKTTIHDGLLDG 85
           Y +G GD++ I     PEL     V  +G +     G + +   ++ E    +       
Sbjct: 51  YLIGPGDRLAISYPRTPELDETVLVLPDGAVSVKTAGVVDVLDLSVAETTAKLTQAARK- 109

Query: 86  YLINPNVSVSILEYRPFFVN--GQVMKPGSYPYHPGLTVNKAITIAGGFTERA 136
            L +P V+V+++E     V+  G V KPG+YP      + +A+  AGGF + A
Sbjct: 110 MLRDPLVTVAVVEAATAKVSVAGAVEKPGAYPLTGRAGIMEAVAQAGGFRDEA 162