Pairwise Alignments

Query, 175 a.a., polysaccharide biosynthesis/export family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 209 a.a., Polysaccharide export protein (NCBI) from Rhodospirillum rubrum S1H

 Score = 60.1 bits (144), Expect = 2e-14
 Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 17/166 (10%)

Query: 26  YRLGVGDQIRIQVYDEPELSFETRVSDNGNIDYPFLGRIRLKGKTLEEVKTTIHDGLLDG 85
           Y +G GD + + V+ +P+LS    V  +G +  P +  +   GKT  E+   I +  L  
Sbjct: 45  YVVGPGDSLDVFVWGQPDLSRSIVVRPDGRLTLPLVTDLVAAGKTPSELSAAITE-QLQT 103

Query: 86  YLINPNVSVSILEYRPFF-----VNGQVMKPGSYPYHPGLTVNKAITIAGGFTERASKTN 140
           Y+ NP VSV ++ +   F     V G+   P +  Y   +T   A+   GG  + A+   
Sbjct: 104 YVQNPVVSVMVVNFAGPFDKQVRVVGEAATPKALQYRDRMTTLDAMIEVGGLKQFAAGNR 163

Query: 141 LFISSSDDPEAKPTKATLLS-----------KLQPGDILTVAESFF 175
             +     PEAK  +  L              L PGD+L + +S+F
Sbjct: 164 AVLVRGQPPEAKSYRVRLEDLMNDGDITANVPLMPGDVLIIPQSWF 209