Pairwise Alignments

Query, 175 a.a., polysaccharide biosynthesis/export family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 193 a.a., Polysaccharide export protein (NCBI) from Rhodospirillum rubrum S1H

 Score = 89.4 bits (220), Expect = 3e-23
 Identities = 57/159 (35%), Positives = 84/159 (52%), Gaps = 2/159 (1%)

Query: 19  AVAN-DDFYRLGVGDQIRIQVYDEPELSFETRVSDNGNIDYPFLGRIRLKGKTLEEVKTT 77
           A+AN  D   L  G+ IRI V++EP LS E  +   GN+  P +G I   G T + +   
Sbjct: 35  AIANVKDGNLLVPGNHIRITVFNEPNLSGEFIIDSTGNLAMPLIGDITAAGVTTQALAGR 94

Query: 78  IHDGLL-DGYLINPNVSVSILEYRPFFVNGQVMKPGSYPYHPGLTVNKAITIAGGFTERA 136
           I D +  + YL +P V+V     RP +V G+V  PG + Y  G+TV  AI  AGG+  RA
Sbjct: 95  IADKIRGENYLRDPRVTVESSSLRPVYVMGEVRGPGEFLYIDGMTVLSAIARAGGYDYRA 154

Query: 137 SKTNLFISSSDDPEAKPTKATLLSKLQPGDILTVAESFF 175
            +  + +   +D +    +A   + +QPGDI+ V E  F
Sbjct: 155 REGQVLLIRQEDGKPVDYRAEEYTPVQPGDIVRVLERRF 193