Pairwise Alignments

Query, 175 a.a., polysaccharide biosynthesis/export family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., putative polysaccharide export protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 51.6 bits (122), Expect = 1e-11
 Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 12/137 (8%)

Query: 49  RVSDNGNIDYPFLGRIRLKGKTLEEVKTTIHDGLLDG-YLINPNVSVSILEYRPFFVNGQ 107
           RV   GNI +P LG++ ++G  + EV   I + ++DG Y+ +P VS+  L ++ + V G 
Sbjct: 95  RVDVEGNISFPILGKLHVEGLKVSEVTALIRNRIIDGKYIKDPLVSLEFLNFK-YSVLGA 153

Query: 108 VMKPGSYPYH-PGLTVNKAITIAGGFTERASKTNLFISSSDDPEAKPTKATLLSK----- 161
           V   G++      +T+ +AI  AG  T+R     + +   +D +    +  L SK     
Sbjct: 154 VGNTGTFSVEGDRITLLEAIAKAGDVTQRGRVNRVAVIREEDGQRVMYQHDLRSKELFES 213

Query: 162 ----LQPGDILTVAESF 174
               LQ  DI+ V   +
Sbjct: 214 PCFYLQQNDIVYVEPKY 230