Pairwise Alignments

Query, 175 a.a., polysaccharide biosynthesis/export family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., polysaccharide export protein (RefSeq) from Shewanella sp. ANA-3

 Score = 44.3 bits (103), Expect = 3e-09
 Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 5/93 (5%)

Query: 27  RLGVGDQIRIQVYDEPELSFETRVSDNGNIDYPFLGRIRLKGKTLEEVKTTIHDGLLDGY 86
           +L VGD++R+ + +  + S +  +  NG I  P+L  I  +G TL  +K  I   L++  
Sbjct: 103 QLSVGDKLRVGILNGEDFSADVEIDANGQIYLPYLPPITAQGLTLSVLKQRISQTLVNEQ 162

Query: 87  LINPN---VSVSILEYRPFFVN--GQVMKPGSY 114
           L+  +   V++S + + P  V   G V +PG +
Sbjct: 163 LMQASSVRVNISPIAWAPVEVTVLGSVFEPGQH 195