Pairwise Alignments

Query, 398 a.a., TetR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 428 a.a., capsular polysaccharide synthesis protein CpsB from Klebsiella michiganensis M5al

 Score = 99.8 bits (247), Expect = 1e-25
 Identities = 95/400 (23%), Positives = 161/400 (40%), Gaps = 43/400 (10%)

Query: 10  FSASLVTLGVTYAPLGVAKPTPNPIVTESGMAVVPF---LNLSTGYNDNLA--KSNQQQD 64
           F A L+ +   +A L  AKP        +G+A + F   +    GYNDN+   +    + 
Sbjct: 7   FLAGLLAVPYAWADLQ-AKP-------HTGVAGIDFESQVGYDVGYNDNVTWQRYGGNEI 58

Query: 65  SSAFSVIESGVGFIVEPQSSKTQLGYRFRNGTYFSSQQDNFTDHYLDLTSDWELNSRHRI 124
            SA+  ++     I E    +  L Y      Y S   DN  +H+      W   S H +
Sbjct: 59  GSAYQGVKPIFKAIGERYEDRYLLMYSGDYRRYASDSADNRDNHFFMFNGKWRFGSMHGL 118

Query: 125 GFEYNLALAHEGRGENDTTLGLDYNQYESHSAN-----------LGYGFGSTEAIGRIET 173
             + +    HE RG  DTT G    Q+     N           L Y +G+ E  G+ E 
Sbjct: 119 SLDLDETFGHEERG-RDTTEGFLPEQFTEFGINQPIATRFFNSELRYSYGAPEGRGKAEV 177

Query: 174 NIGWQDFTYQNNRTITQY----------QDWDELRFNSTFYYQALPRTSFIAQVIANSRR 223
            +  +   ++N  +I             Q+W E    +  + Q      +    I N RR
Sbjct: 178 ALMHKQLRFRNLDSIEDASADFHYYMHDQEWHENSLVAELFDQKAKTLRYRYSFITNQRR 237

Query: 224 YDLIAPGASSKDNNHYFGYLGASWDATGKLRGNAKLGYQQKDF-DAASRKDFDSFSWDVD 282
           Y+L       KD+N Y+  +G     +GK   +  + +  KDF      + F+  +WD++
Sbjct: 238 YEL----NPLKDSNEYYLLVGMKNRLSGKTEIHGNVAWLYKDFIHNPDSQGFNGLNWDIN 293

Query: 283 VTYLVRTYSALQLVTNRRSTDSDGDGDAIDAATYQVNWSHNWNT-QWTTEAALTRLEEDY 341
             +       L L +++R  D    G  I  + + V + H+W   +++T    + + EDY
Sbjct: 294 ADWKPLEQIKLNLHSSQRIKDPTDSGGYILVSNFGVGYEHHWLVDRFSTLVDYSYITEDY 353

Query: 342 --TASNRDDETTNASLRASYDFRRWLTFELGVGRERKDSN 379
               + R D++   SL  +YD+R  + F+L +      SN
Sbjct: 354 KHQTNGRKDQSNLVSLTFNYDYRPSVNFQLKLQWNTMHSN 393