Pairwise Alignments

Query, 446 a.a., capsule biosynthesis protein CapK from Vibrio cholerae E7946 ATCC 55056

Subject, 437 a.a., Phenylacetate--CoA ligase (NCBI) from Rhodospirillum rubrum S1H

 Score = 83.6 bits (205), Expect = 1e-20
 Identities = 94/331 (28%), Positives = 132/331 (39%), Gaps = 37/331 (11%)

Query: 49  RTHLADYQHKQLKKTLENARNHVPFY-----------QDLEVPNLELEAFPYLDKSVLRR 97
           R HLA  Q  +LK TL      VP Y           +DL     +L  FP+  K  LR 
Sbjct: 19  REHLAGLQFARLKDTLTRVYASVPHYRRAFEAKGVSPEDLNTLE-DLARFPFTVKDDLRE 77

Query: 98  DHK-QFISQNKPSVVVKGATSGTTGTPLTILQDRHSVIREQAFVARQLAWAGYRKGD--K 154
            +  +  +  +  VV   A+SGTTG P  +   R  +      +AR +A AG R GD   
Sbjct: 78  AYPFKLFAVPRDQVVRLHASSGTTGLPTVVGYTRADIDTWAGLMARCIACAGGRPGDILH 137

Query: 155 RAWIRGDMVVPLSQKQGPFWRYSWFEQMIVLSSFHLTPKTMSSYLQAMVDFGVEVIQAYP 214
            A+  G     L    G         + +  S   ++       +  + DFG  V+   P
Sbjct: 138 NAYGYGLFTGGLGAHYG--------AEALGCSVVPMSGGNTEKQILLLKDFGANVVCCTP 189

Query: 215 SSIATLARYLE-ANQSYYPAKLKSIMTSSESLSAEDRQVIETRFGCKVFDWYGLFERV-- 271
           S    LA   E          L+  +  +E      R  +E R G +  D YGL E +  
Sbjct: 190 SYAINLAEEAERRGVDLKGGPLRVGLFGAEPWCQGMRLELEERLGIRAMDVYGLSEIMGP 249

Query: 272 -AAIGQCEHGRYHLLSDYSHVEL--------LAAGDGRYELVGTNFNNQYFPLIRYKTGD 322
             A+   E    H   D+   E+        L  G+ + ELV T    Q  P+IRY+T D
Sbjct: 250 GVAVECAEQAGLHGWEDHFLFEVIDPETLRPLPVGE-QGELVITTLTKQALPMIRYRTRD 308

Query: 323 HVHLSENEACPCGRVFPVIERIEGRIGDYLV 353
              LS+ E CPCGR    I R+ GR  D ++
Sbjct: 309 ITRLSD-EPCPCGRTHRRILRVTGRNDDMMI 338