Pairwise Alignments

Query, 446 a.a., capsule biosynthesis protein CapK from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., phenylacetate--CoA ligase from Rhodopseudomonas palustris CGA009

 Score = 60.5 bits (145), Expect = 1e-13
 Identities = 82/336 (24%), Positives = 140/336 (41%), Gaps = 38/336 (11%)

Query: 44  ANEFSRTHLADYQHKQLKKTLENARNHVPFYQDL---------EVPNL-ELEAFPYLDKS 93
           A   SR  +   Q K+L  +L++A ++V  Y+           +   L +L  FP+  K+
Sbjct: 20  AERASRDEIVALQTKRLAWSLKHAYDNVAHYKAAFDRKGVHPSDFRQLSDLSKFPFTVKT 79

Query: 94  VLRRDHK-QFISQNKPSVVVKGATSGTTGTPLTILQDRHSVIREQAFVARQLAWAGYRKG 152
            LR ++     +  + S+V   A+SGTTG P+ +      +      +AR L  AG R+G
Sbjct: 80  DLRDNYPFAMFAVPRESLVRVHASSGTTGKPIVVGYTPKDIDTWATVMARSLRAAGARRG 139

Query: 153 DKRAWIRGDMVVPLSQKQGPFWR---YSWFEQMIVLSSFHLTPKTMSSYLQAMVDFGVEV 209
                    M++  S   G F       +  + +  +   ++       +Q + DF  ++
Sbjct: 140 ---------MIIHNSYGYGLFTGGLGAHYGGEKLGCTVVPVSGGMTERQVQLINDFRPDI 190

Query: 210 IQAYPS-SIATLARYLEANQSYYPAKLKSIMTSSESLSAEDRQVIETRFGCKVFDWYGLF 268
           I   PS  +A L  +         + LK  +  +E  +   R  IE  F     D YGL 
Sbjct: 191 ITVTPSYMLAILDEFKRQGLDPRQSSLKYGVFGAEPWTNAMRAEIEQAFDMDATDIYGLS 250

Query: 269 ERVA--AIGQCEHGR--YHLLSDYSHVELLAAGDG-------RYELVGTNFNNQYFPLIR 317
           E +      +C   +   H+  D+ + E++    G       + ELV T+   + FP+IR
Sbjct: 251 EVIGPGVAQECVETKDGLHIWEDHFYPEVIDPDTGDVLPDGEKGELVFTSLTKEAFPVIR 310

Query: 318 YKTGDHVHLSENEACPCGRVFPVIERIEGRIGDYLV 353
           Y+T D   L    A P  R    +E+I GR  D ++
Sbjct: 311 YRTRDLTRLLPGTARPGMR---RMEKITGRSDDMII 343