Pairwise Alignments

Query, 446 a.a., capsule biosynthesis protein CapK from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., phenylacetate--CoA ligase from Methanococcus maripaludis JJ

 Score = 73.9 bits (180), Expect = 9e-18
 Identities = 102/405 (25%), Positives = 164/405 (40%), Gaps = 48/405 (11%)

Query: 60  LKKTLENARNHVPFYQDL---------EVPNLE-LEAFPYLDKSVLRRDHKQFISQNKPS 109
           +KK L +      FY++          E+ +LE  +  P+ +K  LR  +   +      
Sbjct: 12  VKKLLRHVSEGSDFYKNKFSKTGINIDEISSLEDFKKIPFTEKEELRNAYPLGLQAVPDE 71

Query: 110 VVVK-GATSGTTGTPLTILQDRHSVIREQAFVARQLAWAGYRKGDKRAWIRGDMVVPLSQ 168
            +V+  ++SGTTG+P+ I   +  V      + R    AG    D+         + ++ 
Sbjct: 72  KIVRIHSSSGTTGSPVIIPYTQKDVDTWSEMMMRCYQMAGVTNKDR---------IQITP 122

Query: 169 KQGPFWRYSWFE---QMIVLSSFHLTPKTMSSYLQAMVDFGVEVIQAYPSSIATLARYLE 225
             G +     F+   + +   +  + P      LQ MVD    V+ +  S    LA  + 
Sbjct: 123 GYGLWTAGIGFQLGAERLGAMAIPMGPGNTEKQLQMMVDLKSTVLTSTSSYALLLAEEIR 182

Query: 226 ANQSYYPAKLKSIMTSSESLSAEDRQVIETRFGCKVFDWYGLFERVAAIG---QCE-HGR 281
               +    LK  +  SE  S + R  IE+  G K FD YGL E +   G    CE H  
Sbjct: 183 KKGIHDKIHLKIGVIGSERWSEKMRNRIESELGIKSFDIYGLTE-IYGPGIALDCEYHEG 241

Query: 282 YHLLSDYSHVELLAAGDGRY-------ELVGTNFNNQYFPLIRYKTGDHVHLSENEACPC 334
            H  SD+   E++    G         ELV T    +  PLIRY+T D   +   E C C
Sbjct: 242 MHYWSDHLLFEIIDPVTGENLPDGELGELVITTLTKEGAPLIRYRTRDLTRIIP-EKCKC 300

Query: 335 GRVFPVIERIEGRIGDYL--------VGEDGQKVHILNHIPKGIAGIMACQFVQSERGQI 386
           G  +P I+RI GR  D +         G+    +H LN +      I+  +F    R  +
Sbjct: 301 GSEYPRIDRILGRADDRIKIKGVNIYPGQIEDLIHKLNGVSSEYQ-IILSRF--EGRDSM 357

Query: 387 VVKVVADAEQFNQEQQK-QLISNTQARLGSSLNVTIDIVSALERT 430
           + +V  D  + + E+ K  +I   +  +G S +V    V  L R+
Sbjct: 358 LFRVEVDVSEKDFEETKLAIIKAFKTYIGISPDVECLKVGELPRS 402