Pairwise Alignments

Query, 446 a.a., capsule biosynthesis protein CapK from Vibrio cholerae E7946 ATCC 55056

Subject, 432 a.a., phenylacetate--CoA ligase from Methanococcus maripaludis JJ

 Score = 80.9 bits (198), Expect = 7e-20
 Identities = 88/332 (26%), Positives = 137/332 (41%), Gaps = 39/332 (11%)

Query: 49  RTHLADYQHKQLKKTLENARNHVPFY-----------QDLEVPNLELEAFPYLDKSVLRR 97
           R  + + Q K+L  T+    ++VPFY           +D+E  + +L   P+  K  LR 
Sbjct: 12  REEMRELQSKRLSDTVSRVYHNVPFYRKKMQSMGVYPEDIESID-DLSKLPFTTKQDLRD 70

Query: 98  DHKQFISQNKPSVVVK-GATSGTTGTPLTILQDRHSVIREQAFVARQLAWAGYRKGD--K 154
           ++   I       +V+  A+SGTTG P  +   R  +      VAR L+ AG  + D  +
Sbjct: 71  NYPFGIFSVPMGEIVRVHASSGTTGKPTVVGYTRRDIAMWSEIVARALSCAGASRDDFIQ 130

Query: 155 RAWIRGDMVVPLSQKQGPFWRYSWFEQMIVLSSFHLTPKTMSSYLQAMVDFGVEVIQAYP 214
            A+  G     L    G         + +  +   ++       LQ M DF   V+   P
Sbjct: 131 IAYGYGLFTGGLGLHYGG--------EKLGATVIPISGGNTQKQLQLMADFKTTVLACTP 182

Query: 215 SSIATLARYLE-ANQSYYPAKLKSIMTSSESLSAEDRQVIETRFGCKVFDWYGLFERVAA 273
           S    LA  LE A  +     L+  +  +E  +   R+ IE + G K  D YGL E +  
Sbjct: 183 SYALYLAETLEDAGMTADDINLRVGIFGAEPWTPSMRKEIENKLGIKAMDIYGLSEVMGP 242

Query: 274 IGQCE---HGRYHLLSDYSHVELL---------AAGDGRYELVGTNFNNQYFPLIRYKTG 321
              C+       H+  D+   E++         A  +G  ELV T    +  PL+RY+T 
Sbjct: 243 GVACDCEYQDGLHINEDHFVPEIIDPVTLKPLPAGSEG--ELVFTTITKEGMPLLRYRTR 300

Query: 322 DHVHLSENEACPCGRVFPVIERIEGRIGDYLV 353
           D   L+  E C CGR    + +  GR  D L+
Sbjct: 301 DLTSLN-YEKCKCGRTLVRMNKCTGRSDDMLI 331