Pairwise Alignments

Query, 446 a.a., capsule biosynthesis protein CapK from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., AMP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 54.3 bits (129), Expect = 8e-12
 Identities = 73/340 (21%), Positives = 148/340 (43%), Gaps = 44/340 (12%)

Query: 52  LADYQHKQLKKTLENARNHVPFYQD----LEVPNL----ELEAFPYLDKSVLRRDHKQF- 102
           L  +Q ++L+ TLE+AR H P++ +    +   +L    +L   P+++  +LR    +  
Sbjct: 26  LERWQMERLRATLEHAR-HSPYHAERLAGIAASSLYSRHDLARLPFMEADILREAPLKLL 84

Query: 103 -ISQNKPSVVVKGATSGTTGTPLTILQDRHSVIREQAFVARQLAWAGYRKGDKRAWIRGD 161
            +SQ+  +  V   TSG+TG P  +      +     F +  L              RG+
Sbjct: 85  CVSQDDVARAVTFDTSGSTGPPKRVFCTAEDIENTITFFSHGLL---------SFMQRGE 135

Query: 162 MVVPLSQKQGPFWRYSWFEQMIVLSSFHLTPKTMSSYLQ----AMVDF----GVEVIQAY 213
            ++ L   + P    +   +++  ++  +  + +S+  +    ++ D     GV  +   
Sbjct: 136 ALLALLPAERP----ASVGRLLGEAAGRVGVRPLSASPEHGWDSIADMAHREGVRAVVGS 191

Query: 214 PSSIATLARYLEANQSYYPA-KLKSIMTSSESLSAEDRQVIETRFGCKVFDWYGLFER-V 271
           P  +   A  L  +++ +P+  + +++   ++     R ++    GC+V   +G+ E  +
Sbjct: 192 PLHVREFA--LAWHRAGFPSGAISTVLLCWDAAPRALRALLAETLGCEVRHHWGMTETGM 249

Query: 272 AAIGQCEHGRYHLLSDYSHVEL------LAAGDGRY-ELVGTNFNNQYFPLIRYKTGDHV 324
                C     HL  +   VE+      +   DG + ELV T  + +  PLIRY+TGD  
Sbjct: 250 GGALSCGEAGMHLRENDLLVEVTDPVSGVPLPDGTWGELVVTTLDRRAMPLIRYRTGDRG 309

Query: 325 HLSENEACPCGRVFPVIERIEGRIGDYLVGEDGQKVHILN 364
            +     CPCG     I+ + GR+ D  +  DG  + +++
Sbjct: 310 RILPG-TCPCGSPQRRIDLVPGRLADERLLPDGTPLRLID 348