Pairwise Alignments

Query, 446 a.a., capsule biosynthesis protein CapK from Vibrio cholerae E7946 ATCC 55056

Subject, 432 a.a., phenylacetate-coenzyme A ligase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 72.0 bits (175), Expect = 3e-17
 Identities = 108/436 (24%), Positives = 181/436 (41%), Gaps = 65/436 (14%)

Query: 49  RTHLADYQHKQLKKTLENARNHVPFY----QDLEVPNLELEAF------PYLDKSVLRRD 98
           R  L   Q  +LKK ++   ++ PFY    Q++ +   ++         P+  K  LR +
Sbjct: 12  RESLRKIQSIRLKKIVDYVYHNTPFYRKKMQEMGITPDDINTIDDIVKLPFTTKHDLRDN 71

Query: 99  HKQFISQNKPSVVVK-GATSGTTGTPLTILQDRHSVIREQAFVARQLAWAGYRKGD--KR 155
           +   +     S +V+  A+SGTTG P  +   R  +      ++R     G  + D  + 
Sbjct: 72  YPFGLCAVPMSQIVRIHASSGTTGKPTVVGYTRKDLSSWAECISRAFTAYGAGRSDIFQV 131

Query: 156 AWIRGDMVVPLSQKQGPFWRYSWFEQMIVLSSFHLTPKTMSSYLQAMVDFGVEVIQAYPS 215
           ++  G     L    G         + I  S   ++       +  M DFG  V+   PS
Sbjct: 132 SYGYGLFTGGLGAHAGA--------ENIGASVIPMSSGNTEKQITLMHDFGSTVLCCTPS 183

Query: 216 SIATLARYLEANQSYYPAK---LKSIMTSSESLSAEDRQVIETRFGCKVFDWYGLFERVA 272
               LA  ++   S YP +   LK     +E  +   R  IE + G K +D YGL E +A
Sbjct: 184 YALYLADAIK--DSGYPREEFQLKVGALGAEPWTENMRHEIEEKLGIKAYDIYGLSE-IA 240

Query: 273 AIG-----QCEHGRYHLLSDYSHVELLAAGDGRY-------ELVGTNFNNQYFPLIRYKT 320
             G     +C+HG  HL  D+   E++     +        ELV T+   +  PL+RY+T
Sbjct: 241 GPGVGYECECQHGT-HLNEDHYFPEIIDPNTLQPVEPGQTGELVFTHLTKEGMPLLRYRT 299

Query: 321 GDHVHLSENEACPCGRVFPVIERIEGRIGDYLVGEDGQKVHILNHIPKGIAGIMA----- 375
            D   L  ++ C CGR    ++RI GR  D L+      +  +N  P  I  ++      
Sbjct: 300 RDLTALHYDK-CSCGRTLVRMDRILGRSDDMLI------IRGVNVFPTQIESVILEMEEF 352

Query: 376 ----CQFVQSERG------QIVVKVVADAEQFNQ--EQQKQLISNTQARLGSSLNVTIDI 423
                  V  E        Q+ V+    +++ N+    +K+L S  Q+ LG  +NV +  
Sbjct: 353 EPHYLLIVGRENNTDTMELQVEVRPDFYSDEINRMLALKKKLASRLQSVLGLGVNVKLVE 412

Query: 424 VSALERTANGKIRQAI 439
             ++ER+  GK ++ I
Sbjct: 413 PRSIERSV-GKAKRVI 427