Pairwise Alignments

Query, 469 a.a., sugar transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 504 a.a., flippase from Methanococcus maripaludis JJ

 Score = 55.5 bits (132), Expect = 4e-12
 Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 18/212 (8%)

Query: 193 MLKRLLAYGIPIMLAGGIGVLGGRIDRLFIAHFVGMNETGVYAAQANLLMGVLGLVFMVI 252
           + K L +YG+P+M+     ++   ID + + +F G+N    Y   A   + +L      +
Sbjct: 230 LTKDLFSYGLPLMMGSAGALVLNYIDGICLTYFAGLNAVADYRNVAMPTVSILRYFATAV 289

Query: 253 SMPLYP---NLAKHAEDKIALVSQHKTYLHLLVTLTFPALLGLGILQDEIIRLFLGEQYL 309
              L+P    L +     I   S  K  L+  V + FP  +      + I+ LF   QYL
Sbjct: 290 GAVLFPMSSELWEMGHGGILGKSVEKICLYSFVAV-FPITVLTAYFPEVIVNLFFNTQYL 348

Query: 310 SRSSEL-FWVLAIAVYLINFKGHYLDHGL-QFLLQTRKLLWVSLSGLIASIFLLPLMLNQ 367
             +  +    L    + +N  G  + +G+ + LL T+ + + ++  LI +I L+P    +
Sbjct: 349 PAADAIRILSLGTIFFTLNSIGFNVLNGIGKSLLSTKIIYFGAIFNLIFNILLIP----K 404

Query: 368 FGMFGAAITLLIVSGLVAILSFISSWRSGYRY 399
           FG+ GA+ T         +L ++  W    RY
Sbjct: 405 FGIVGASAT--------TVLGYLLMWILQARY 428