Pairwise Alignments

Query, 469 a.a., sugar transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 491 a.a., putative polysaccharide biosynthesis protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 75.5 bits (184), Expect = 4e-18
 Identities = 87/429 (20%), Positives = 185/429 (43%), Gaps = 39/429 (9%)

Query: 8   YAPVQVFSALSVFALIA-VQTRFLSPEHYGVLAVAMVVLELVRAFSAQWLNTSMLRLYPG 66
           Y  +  +S + +  ++A +  R LSP+ +GV+A+A V++     F+   ++ ++++    
Sbjct: 15  YTALAKYSGIIISLVVAGILARLLSPDDFGVVAIATVIIAFFNLFTDMGISPAIVQ---- 70

Query: 67  YSDREQVQLVQSISLLVIIGSLLGFIVIAATLFIYQQLNWERLLVLSALLSVKSIF-QYQ 125
           +    + +L    S  V  G  +  +  AA+  I        L  L  LLSV   F    
Sbjct: 71  HKSLTKEELSDIFSFTVWTGIGISILFFAASWLIADYYESGILRTLCQLLSVNLFFASAN 130

Query: 126 LELSRLNERLSVYRQATVLQSISAVVLSILSLSWAATIESALFALTLSFGIGALCLGL-- 183
           +    L  R   ++   V   I  +     +++ AA   + L+AL ++  + ++ + +  
Sbjct: 131 IVPGALFYRNKEFKFIAVRSFIIQIAGGAGAIT-AALCGAGLYALIINPILSSILIFVIS 189

Query: 184 ----PQRPKWHIAM--LKRLLAYGIPIMLAGGIGVLGGRIDRLFIAHFVGMNETGVYAAQ 237
               PQR ++ + +  L+++ +Y     L   I      +D+L I  ++ M++ G Y   
Sbjct: 190 YQRYPQRLRFTLGLKVLRKIFSYSAYQFLFNVINYFSRNLDKLLIGKYMSMSDLGYYEKS 249

Query: 238 ANLLMGVLGLVFMVISMPLYPNLAKHAEDKIALVSQHKTYLHLLVTLTFPALLGLGILQD 297
             L+M  L  +  VI+  ++P  +    DK  L + ++  +  L  +  P  +      +
Sbjct: 250 YRLMMLPLQNITQVITPVMHPIFSDFQNDKEKLATSYERIVRFLSFIGLPLSVLFFFTAE 309

Query: 298 EIIRLFLGEQYLSRSSELFWVLAIAVYLINFKGHYLDHGLQFLLQTRKLLW--------V 349
           E+  +  G+Q+L  S  +F +L+++V            G+Q +L +   ++        +
Sbjct: 310 EVTLIIFGDQWLP-SVPVFRILSLSV------------GIQIILSSSGSIFQAAGDTRSL 356

Query: 350 SLSGLIASIFLLPLMLNQFGMFGAAITLLIVSGLVAILSFISSWRSGYRYAIGMDG---I 406
            + GL +SI  +  ML     FG    + I   +   ++F+  +   YR     +    I
Sbjct: 357 FVCGLFSSILNVTGMLTGIFYFGTLTAVAICIVITFTINFVQCYWMMYRVTFQRNAWIFI 416

Query: 407 KVIISALLM 415
           + ++S LL+
Sbjct: 417 RQLLSPLLV 425