Pairwise Alignments

Query, 413 a.a., UDP-N-acetyl-D-mannosamine dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., polysaccharide biosynthesis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  162 bits (409), Expect = 2e-44
 Identities = 124/403 (30%), Positives = 201/403 (49%), Gaps = 29/403 (7%)

Query: 4   KVSVIGLGYIGLPTAAVLASRGLDVVGVDVNAHAVDTINKGEIHIVE-PDLDIV-VRSAV 61
           K+ +IGLGY+GLP A     + L  +G D+N   ++ ++ G    +E  D ++   +  V
Sbjct: 9   KIGIIGLGYVGLPLAVEFGKQRL-TIGFDINQARINELSAGHDSTLECSDTELAEAKKLV 67

Query: 62  MTGKLKATLTAEPADAFLVAVPTPFKGDNHEPDLSYIEAAAKTIAPVLAKGNLVVLESTS 121
            T  L+A    +  + F+V VPTP   ++ +PDL+ +  A++T+  V+  G++++ EST 
Sbjct: 68  YTTSLEAL---KECNVFIVTVPTPID-EHKQPDLTPLIKASETLGKVIKHGDVIIYESTV 123

Query: 122 PVGTTEKLAQWLAEARPDLTFPQQKGIAADVKIAYCPERVLPGYVLQELVSNDRVIGGVS 181
             G TE+    + E    L F Q      D    Y PER+ PG     + +  +V  G +
Sbjct: 124 YPGATEEECIPVVEQVSGLKFNQ------DFFAGYSPERINPGDKEHRVTNILKVTSGST 177

Query: 182 KACSEKAVALYKTF-VKGECIVTNARTAEMAKLTENSFRDVNIAFANELSLVCNKLKINV 240
              +E    LYK+  V G    ++ + AE AK+ EN+ RDVNIA  NELS++ NKL I+ 
Sbjct: 178 PEVAEYVDQLYKSIIVAGTHKASSIKVAEAAKVIENTQRDVNIALINELSIIFNKLGIDT 237

Query: 241 WELIRLANRHPRVSILNPGPGVGGHCIAVDPWFIVNSCPD---EAQLIRTAREVNDGKPH 297
            E++  A          PG  VGGHCI VDP+++ +         ++I   R +NDG   
Sbjct: 238 LEVLEAAGTKWNFLPFRPGL-VGGHCIGVDPYYLTHKAQSVGYHPEMILAGRRLNDGMGQ 296

Query: 298 WVVDQVKQAADQFKKPI------IACLGLAFKADIDDLRESPALDITKHLAESKVGQLLA 351
           +VV Q+       KK I      +  +GL FK +  DLR +  +DI + L E  +  +  
Sbjct: 297 YVVSQL--VKKMLKKRIHVEGANVLVMGLTFKENCPDLRNTKVVDIVRELKEYNI-NVDI 353

Query: 352 VEPNITELPSKLAKQGIELVSLERALELANIVVVLVDHKEFKA 394
           V+P   E      + G+ L   +  +   + +++ V H EF+A
Sbjct: 354 VDP-WCESHEAEQEYGLTLCG-QPKVNHYDAIIIAVSHNEFRA 394