Pairwise Alignments

Query, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1031 a.a., Acriflavin resistance plasma membrane protein from Pseudomonas fluorescens FW300-N2E2

 Score =  502 bits (1293), Expect = e-146
 Identities = 309/1015 (30%), Positives = 545/1015 (53%), Gaps = 14/1015 (1%)

Query: 1    MWLSDVSVKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIE 60
            M LS + + RPVA  +  + + + G++++  L V  +P ++ P + V T Y GAS  ++ 
Sbjct: 1    MNLSRLFILRPVATTLSMLAIILAGLIAYRLLPVSALPQVDYPTIRVMTLYPGASPDVMT 60

Query: 61   SQITSVLEDQLAGISGIDEITSVSRNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLP 120
            S +T+ LE Q   + G+ ++ S S  G S IT+ F L  +++     ++ A+  A   LP
Sbjct: 61   SAVTAPLERQFGQMPGLTQMASTSSGGASVITLRFNLDINMDVAEQQVQAAINAATNLLP 120

Query: 121  EEADDPQVF-KNNGSGQASVYINLSSSEMDRTQLTDYIERVLLDRFSLISGVSSVDVSGG 179
            ++   P V+ K N +    + + ++S  M   +L D ++  +  + + ISGV  V ++GG
Sbjct: 121  KDLPAPPVYNKVNPADTPVLTLAITSKTMLLPKLNDLVDTRMAQKIAQISGVGMVTIAGG 180

Query: 180  LYKVMYVRIKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTVMSVRTARGYQSAED 239
              + + +++ PE +A  G+  +D+   +   N+  P G     + V  +       S +D
Sbjct: 181  QRQAVRIKVNPEALAANGMNLADVRTLIGASNVNQPKGNFDGPTRVSMLDANDQLTSPKD 240

Query: 240  FEYLVVKRASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAKR 299
            +  L++  A+ G P+ LKDVA +  GAENE     ++    V + I  Q  AN +EV  R
Sbjct: 241  YAELILAYAN-GAPLRLKDVAQIVDGAENERLAAWANENQAVLLNIQRQPGANVIEVVDR 299

Query: 300  VHEEVDKVQQFLPKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQLRAT 359
            +   +  +   LP G  + +  D T  I  S+++V   L I   LV++V ++F+ ++ AT
Sbjct: 300  IKALLPSITDNLPAGLDVTVLTDRTQTIRASVTDVQHELLIAIALVVMVTFLFLRRVSAT 359

Query: 360  LIPAVTVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIERGEK 419
            +IP+V VP+SLI  F   Y  GFS+N +TLMAL ++ G VVDDAIV++ENI   IE G+ 
Sbjct: 360  IIPSVAVPLSLIGTFGVMYLAGFSVNNLTLMALTIATGFVVDDAIVMLENIARFIEEGDS 419

Query: 420  PLLAAYKGTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFSSLIAL 479
            PL AA KG +++GF +I+ TL L+ V +P+ FM  +VG LF EF++ LA+A++ S +++L
Sbjct: 420  PLQAALKGAKQIGFTLISLTLSLIAVLIPLLFMADVVGRLFREFAITLAVAILISLVVSL 479

Query: 480  TLTPVLGSKLLKANVK---PGRFNQLIDRLFARLESGYRQVVSRAIRWRWAAPVVIAACI 536
            TLTP++ ++LLK   K    GRF +        L + Y + +   +R +    +V    +
Sbjct: 480  TLTPMMCARLLKREPKEEEQGRFYRASGAWIDWLIAAYGRKLQWVLRHQPLTLLVAVGSL 539

Query: 537  GGSYGLMQLVPAQLTPSEDRGVIFSFVRGADATSYNRMAANMDLVEQRLMPLLGQGFLKS 596
              +  L   VP    P +D GVI        + S+   AA  +  +Q    +L    ++S
Sbjct: 540  VLTVVLYLAVPKGFFPVQDTGVIQGISEAPQSISF---AAMSERQQQLAKVILADPAVES 596

Query: 597  FSIQSPAFGGNAGDQTGFVIMILEDWNDRTVTAQEALSQVRKALAGIPDVRVF----PFM 652
             S      G NA   +G +++ L+  ++R  +A E +++++  L  +  +R+F      +
Sbjct: 597  LSSYIGVDGDNATLNSGRLLINLKPHSERDDSATEIIARLQPQLDRLVGIRLFMQPVQDL 656

Query: 653  PGFRGGSNEPVQFVLGGSDYSELKTWAEKLEEEAEKSPFMTGADIDYSEKTPELVVTIDK 712
                  S    QF L   D   L  W+ +L E   +   +T    D  +K  ++ + ID+
Sbjct: 657  TIEDRVSRTQYQFSLSSPDAELLSLWSGRLVEALAQQAELTDVASDLQDKGLQVFLVIDR 716

Query: 713  QRAAELGISVKSISDTLEVMLGGKKVTTFVERGEEYDVYLRGDENSFNNAADLSQIYMRT 772
              A+ LG+SV +I+D L    G ++++T   +  +Y V L+           L QI+++T
Sbjct: 717  DAASRLGVSVSNITDALYDAFGQRQISTIYTQASQYRVVLQAQAGERIGPQALDQIHVKT 776

Query: 773  ATGELVTLDTVTRIDEVASAIRLAHYNKQKSVTITANLEAGYTLGQALDFLDQKAQEI-L 831
              G  V L ++ R++E  + + +AH  +  +V ++ NL  G  LG A+D +++  ++I +
Sbjct: 777  TDGGQVRLSSLARVEERQAQLAIAHIGQFPAVMMSFNLAPGVALGHAVDVIEKVQRDIGM 836

Query: 832  PNDISVSYSGESKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPLVVMLTVPMGVFG 891
            P  +   + G ++ F+ + SS  ++   A++  Y+VL   +ES+I+P+ ++ T+P    G
Sbjct: 837  PVGVQTEFQGAAQAFQASLSSTLLLILAAVVTMYIVLGVLYESYIHPITILSTLPSAAIG 896

Query: 892  GFLGLFVMGQGMNIYSQIGMIMLIGMVTKNGILIVEFA-NQLRDRGVEFEKAIIDASARR 950
              L L + G  + + + IG+I+LIG+V KN I++++FA +  R++GV+ + AI  A+  R
Sbjct: 897  ALLALILSGNDLGMIAIIGIILLIGIVKKNAIMMIDFALDAERNQGVDPQTAIYQAALLR 956

Query: 951  LRPILMTAFTTLAGSIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLLVIPAMY 1005
             RPILMT    L G+IPL+ +TG+G E R  +G V+  G+  + ++TL   P +Y
Sbjct: 957  FRPILMTTLAALFGAIPLMFATGSGAELRQPLGLVMVGGLLVSQVLTLFTTPVIY 1011