Pairwise Alignments

Query, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1034 a.a., Acriflavin resistance plasma membrane protein from Pseudomonas fluorescens FW300-N2E2

 Score =  523 bits (1347), Expect = e-152
 Identities = 315/1018 (30%), Positives = 535/1018 (52%), Gaps = 23/1018 (2%)

Query: 1    MWLSDVSVKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIE 60
            M LS   ++RPVA ++LS  + + G V F  L V  +P ++ PV+ V     GAS  ++ 
Sbjct: 1    MNLSGPFIRRPVATMLLSFAITLLGGVCFGLLPVSPLPQMDFPVIVVQANLPGASPEVMA 60

Query: 61   SQITSVLEDQLAGISGIDEITSVSRNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLP 120
            S + + LE     I+G++ ++S S  G +R+ + F+L  D+N    +++ A+  ++  LP
Sbjct: 61   STVATPLERSFGAIAGVNTMSSRSSQGSTRVILQFDLDRDINGAAREVQAAINASRNLLP 120

Query: 121  EEADDPQVFKNNGSGQASVYI-NLSSSEMDRTQLTDYIERVLLDRFSLISGVSSVDVSGG 179
                    +K     QA + + +L+S  + + QL D    +L    S +SGV  V + G 
Sbjct: 121  SGMRSMPTYKKVNPSQAPIMVLSLTSDVLKKGQLYDLASTILSQSLSQVSGVGEVQIGGS 180

Query: 180  LYKVMYVRIKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTVMSVRTARGYQSAED 239
                + + ++P L+   GVA  D+  A+   N+  P G V +D  +  V+     + A+D
Sbjct: 181  SLPAVRIELEPHLLNQYGVALDDVRTAVADSNVRRPKGSVEDDRRMWQVQANDQLEKAKD 240

Query: 240  FEYLVVKRASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAKR 299
            +E L++ R  DG+ + LKDVA V    E+  ++   +    V + I  Q+ AN +E    
Sbjct: 241  YETLII-RYQDGSVLRLKDVAKVTDSVEDRYNSGFFNNDAAVLLVINRQAGANIIETVNE 299

Query: 300  VHEEVDKVQQFLPKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQLRAT 359
            +  ++  +Q  LP   +L +  D +  I+ ++ E   TL I   LV+LV+++F+G  RA+
Sbjct: 300  IKAQLPALQAVLPASVKLNLAMDRSPVIKATLHEAEMTLLIAVALVVLVVFLFLGNFRAS 359

Query: 360  LIPAVTVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIERGEK 419
            LIP + VPVSL+  F   Y +GFS+N ++LMALIL+ GLVVDDAIVV+ENI  HI+ G  
Sbjct: 360  LIPTLAVPVSLVGTFAVMYLYGFSLNNLSLMALILATGLVVDDAIVVLENISRHIDEGVP 419

Query: 420  PLLAAYKGTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFSSLIAL 479
            P+ AAY+G  EVGF +++  + LV VFL I FM G++  LF EFS+ LA +++ S +++L
Sbjct: 420  PMTAAYRGAEEVGFTLLSMNVSLVAVFLSILFMGGIIESLFREFSITLAASIVVSLVVSL 479

Query: 480  TLTPVLGSKLLKANVKPGRFNQLID---RLFARLESGYRQVVSRAIRWRWAAPVVIAACI 536
            TLTP+L ++ LK +V PG+ N+L     RL  R+  GY   +   +R R    + +   I
Sbjct: 480  TLTPMLCARWLKPHV-PGQENRLQRWSLRLNERMVRGYATSLDWVLRHRRLTLLSLLVTI 538

Query: 537  GGSYGLMQLVPAQLTPSEDRGVIFSFVRGADATSYNRMAANMDLVEQRLMPLLGQGFLKS 596
            G +  L  +VP    P +D G +  FVRG D  S+N M   M++  + +        LK 
Sbjct: 539  GVNVALYVVVPKTFMPQQDTGQLIGFVRGDDGLSFNVMQPKMEIFRRAV--------LKD 590

Query: 597  FSIQSPA--FGGNAGDQTGFVIMILEDWNDRTVTAQEALSQVRKALAGIPDVRVFPF--- 651
             ++QS A   GGN G    F+++ L+   +R ++AQ+ + ++RK +  +P  ++      
Sbjct: 591  EAVQSVAGFIGGNNGTNNAFMLVRLKPIKERNISAQKVIERLRKEMPKVPGAQLMLMADQ 650

Query: 652  ---MPGFRGGSNEPVQFVLGGSDYSELKTWAEKLEEEAEKSPFMTGADIDYSEKTPELVV 708
                 G R  +     ++L  +D + L+ W  K+       P +T  D        ++ +
Sbjct: 651  DLQFGGGREQTTSQYSYILQSADLASLRAWYPKVVAAFRALPELTAIDARDGGGAQQVTL 710

Query: 709  TIDKQRAAELGISVKSISDTLEVMLGGKKVTTFVERGEEYDVYLRGDENSFNNAADLSQI 768
             +D+ +A  LGI +  ++  L      ++++T  +   +Y V +  +     + + L Q+
Sbjct: 711  VVDRDQAKRLGIDMDMVTAVLNNAYSQRQISTIYDSLNQYQVVMEVNPKYAQDPSTLEQV 770

Query: 769  YMRTATGELVTLDTVTRIDEVASAIRLAHYNKQKSVTITANLEAGYTLGQALDFLDQKAQ 828
             + TA G  V L  +   +      R++H  +  S  I+ ++  G T+ Q    +++   
Sbjct: 771  QVITADGARVPLSAIAHYENSLEDDRVSHEGQFASEGISFDMAEGVTVEQGTAAIERALA 830

Query: 829  EI-LPNDISVSYSGESKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPLVVMLTVPM 887
            ++ LP D+ V  +G +  F   Q S   +   ALL  YLVL   +ES+I+PL ++ T+P 
Sbjct: 831  KLGLPEDVIVKMAGTADAFAATQKSQPFMILGALLAVYLVLGVLYESYIHPLTILSTLPS 890

Query: 888  GVFGGFLGLFVMGQGMNIYSQIGMIMLIGMVTKNGILIVEFANQLRDRGVEFEKAIIDAS 947
               G  L ++ +G   ++ S +G+ +LIG+V KN IL+++ A QL   G    ++I  A 
Sbjct: 891  AGVGALLSIYALGGEFSLISLLGLFLLIGVVKKNAILMIDLALQLERAGQTPLESIRSAC 950

Query: 948  ARRLRPILMTAFTTLAGSIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLLVIPAMY 1005
              RLRPILMT    + G++PL++    G E R  +G  I  G+ F+ ++TL   P +Y
Sbjct: 951  LLRLRPILMTTLAAILGALPLLLGAAEGSEMRQPLGLTIIGGLVFSQVLTLYTTPVVY 1008