Pairwise Alignments

Query, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1048 a.a., Hydrophobe/amphiphile efflux-1 HAE1 from Pseudomonas syringae pv. syringae B728a

 Score =  508 bits (1307), Expect = e-147
 Identities = 336/1024 (32%), Positives = 538/1024 (52%), Gaps = 32/1024 (3%)

Query: 8    VKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIESQITSVL 67
            + RP+ A V+++ +   G +S ++L + + PDI  P V +S  Y GASA  +E  +T V+
Sbjct: 6    IDRPIFAWVIAICIMFAGGLSISQLPLEQYPDIAPPTVKISATYTGASAKTVEDSVTQVI 65

Query: 68   EDQLAGISGIDEITSVSRN-GMSRITVTFELGYDLNTGVSDIRDAVARAQRSLPEEADDP 126
            E Q+ G+  +  +++ S + G + I++TF  G D +     +++ + +A+  LP+     
Sbjct: 66   EQQMKGLDRLTYMSASSSSAGSASISLTFAAGTDPDVAQMQVQNKLQQAESRLPQSVQSE 125

Query: 127  QVFKNNGSGQASVYINLSSSE--MDRTQLTDYIERVLLDRFSLISGVSSVDVSGGLYKVM 184
             +    GS    + + L+S    +  TQ+ DYI   LLD+ S + GV  V   G  Y  M
Sbjct: 126  GLTVTKGSSDFLMLVALASDNESVTGTQIGDYISSTLLDQLSRVDGVGDVQTLGSGY-AM 184

Query: 185  YVRIKPELMAGRGVATSDISDALNKENLESPGGQ------VRNDSTVMSVRTARGYQSAE 238
             + + P  M    +  SDIS AL  +N E   GQ      V       ++      Q+ E
Sbjct: 185  RIWLDPARMEKYSLMPSDISSALEAQNTEVSAGQLGALPAVEGQQLNATISARSKLQTPE 244

Query: 239  DFEYLVVKRASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAK 298
             FE +VVK +SDG  + L+DVA V +G+E+ +     +G    +MGI   S AN L V +
Sbjct: 245  QFENVVVKSSSDGAVVLLRDVARVELGSESYDINSALNGRPAAAMGIQLASGANALSVGE 304

Query: 299  RVHEEVDKVQQFLPKGTRL--AIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQL 356
             +  ++ +++ F P   +L   I YD+T F+  SI EV  +L     LV+L++++F+  L
Sbjct: 305  AIKAKLKELEPFYPAQMQLKTVIAYDTTPFVSLSIKEVVKSLGEAIVLVVLIMFLFMQNL 364

Query: 357  RATLIPAVTVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIER 416
            RATLIPA+TVPV L+  F     FG+SIN +T+ A++L+IGL+VDDAIVVVEN+   ++ 
Sbjct: 365  RATLIPAITVPVVLLGTFGVLALFGYSINTLTMFAMVLAIGLLVDDAIVVVENVERVMDE 424

Query: 417  GE-KPLLAAYKGTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFSS 475
                PL A  K   E+  A+I   LVL  VF+P++F  G  G+++ +FSV +  A++ S 
Sbjct: 425  EHLSPLEATRKSMDEITSALIGIALVLSAVFIPMAFFSGSTGIIYRQFSVTIVSAMLLSV 484

Query: 476  LIALTLTPVLGSKLLKAN-----VKPGRFNQLIDRLFARLESGYRQVVSRAIRWRWAAPV 530
            L+A+TLTP L + +LKA+      K G F    +R F R    Y++ VS  I  R    +
Sbjct: 485  LVAMTLTPALCATMLKASDAQLHAKRGGFFGWFNRTFDRSADRYQRGVSGVIEHRVKGLL 544

Query: 531  VIA-ACIGGSYGLMQLVPAQLTPSEDRGVIFSFVRGADATSYNRMAANMDLVEQRLMPLL 589
            V A   +  + G + L P    P ED+G + + ++     + +R  A M   E  ++   
Sbjct: 545  VYALVLVVMAVGYVSL-PTSFLPDEDQGALMAQIQLPVGATDSRTQAVMRQFEAYMLKQP 603

Query: 590  GQGFLKSFSIQSPAFGGNAGDQTGFVIMILEDWNDRTVTAQEALSQVRKA---LAGIPDV 646
                L   SI     GGN+   T    + L+DW++R+   Q A    ++A   LA I D 
Sbjct: 604  EVEAL--ISISGLGMGGNS-QNTARAFIKLKDWSERSGKEQGAAQVAQRATLALASIGDA 660

Query: 647  RVFPFMP----GFRGGSNEPVQFV-LGGSDYSELKTWAEKLEEEAEKSPFMTGADIDYSE 701
             VF   P    G    S   VQ   LGG  +  L    E+  E A K   M G   +  +
Sbjct: 661  SVFVMQPPAVRGLGQSSGFDVQLKDLGGVGHEALVAAREQFIELARKDSSMLGVRSNGLD 720

Query: 702  KTPELVVTIDKQRAAELGISVKSISDTLEVMLGGKKVTTFVERGEEYDVYLRGDENSFNN 761
             TP+L VTID ++A  L +S   I+ TL   LGG  +  F+ +G    VY++G+  S   
Sbjct: 721  DTPQLKVTIDDRKAGALSLSTSDINSTLSTALGGSYINDFLNQGRVKKVYVQGEAASRMQ 780

Query: 762  AADLSQIYMRTATGELVTLDTVTRIDEVASAIRLAHYNKQKSVTITANLEAGYTLGQALD 821
            +ADL   ++R +  E+V   +         +  L  YN   S+ +  +   G + G A+D
Sbjct: 781  SADLDHWFVRNSNDEMVPFSSFASSSWSYGSPLLERYNGSSSLEVVGDPAPGVSSGTAMD 840

Query: 822  FLDQKAQEILPNDISVSYSGESKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPLVV 881
             ++   ++ LP  I   ++G+S   + + S   +++A+++L  +L LAA +ES+  P  V
Sbjct: 841  AVEAIIKQ-LPEGIGYEWTGQSYQLRLSGSQAPMLYAISVLFVFLCLAALYESWSVPFSV 899

Query: 882  MLTVPMGVFGGFLGLFVMGQGMNIYSQIGMIMLIGMVTKNGILIVEFANQLRDRGVEFEK 941
            ML VP+GV G  L   + G   ++Y Q+G++  +G+  KN ILIVEFA  L+++G    +
Sbjct: 900  MLVVPLGVVGAVLATRISGLSNDVYFQVGLLTTVGLAAKNAILIVEFAKHLQEQGKSLHE 959

Query: 942  AIIDASARRLRPILMTAFTTLAGSIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLLVI 1001
            A + A+ +RLRPILMT+   + G +PL +S+GAG   R A+GT +  GM  AT++ + ++
Sbjct: 960  ATLLAARQRLRPILMTSLAFMFGVLPLALSSGAGSAGRNAIGTGVLGGMFSATVLGIFLV 1019

Query: 1002 PAMY 1005
            P  +
Sbjct: 1020 PLFF 1023