Pairwise Alignments

Query, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1044 a.a., transport transmembrane protein from Sinorhizobium meliloti 1021

 Score =  660 bits (1704), Expect = 0.0
 Identities = 370/1028 (35%), Positives = 600/1028 (58%), Gaps = 25/1028 (2%)

Query: 8    VKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIESQITSVL 67
            ++RP+ ALV++ L+ V G+ ++  + +RE+P ++ PVVSV+T + GAS   I+ ++TSV+
Sbjct: 25   IRRPIFALVVNTLIVVAGLAAWNGVEIRELPQVDQPVVSVTTEFDGASPETIDREVTSVI 84

Query: 68   EDQLAGISGIDEITSVSRNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLPEEADDPQ 127
            E  ++ + GI  I+S S  G SR+T+ F    D+    +D+RDA+ R    LP++AD+P+
Sbjct: 85   EGAVSRVQGIKGISSSSSFGRSRVTLEFSDTTDIGQAANDVRDALGRITGQLPDDADEPR 144

Query: 128  VFKNNGSGQASVYINLSSSEMDRTQLTDYIERVLLDRFSLISGVSSVDVSGGLYKVMYVR 187
            + K +   Q  + + L+S  M    +T  +E  + DR + + GV+ V V G   K+  + 
Sbjct: 145  IVKADSDSQPIMRLALTSDTMSMDDMTLLVENEISDRLAAVEGVADVTVYGDQEKIFRID 204

Query: 188  IKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTVMSVRTARGYQSAEDFEYLVVKR 247
            +    +AGRGV  +++ +AL+  + + P G + + S  +SVR     Q+ E FE L++  
Sbjct: 205  LNQAKLAGRGVTVANLREALSDASYDVPAGSLTSASQDISVRATADLQTPEQFENLML-- 262

Query: 248  ASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAKRVHEEVDKV 307
               G  + L+DVA V +G +   S  +S+G   + +GI+ Q+ +N +++++ V   VD +
Sbjct: 263  ---GNNVRLRDVATVTLGPDTGTSALRSNGREGIGLGIIRQAQSNTVDISEGVRSVVDAI 319

Query: 308  QQ-FLPKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQLRATLIPAVTV 366
                LP GT L I  D  VFI  +I EV   LF+   +V LV+Y+F+   RATLIP +T+
Sbjct: 320  SSDILPTGTELKITSDDAVFINGAIHEVEIALFVAVFIVTLVIYLFLLDWRATLIPTITM 379

Query: 367  PVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIERGEKPLLAAYK 426
            P++LI    A Y  GFSIN++TL+A++L+ GLVVDDAIVV+ENI      G  P  AA  
Sbjct: 380  PIALIGTVAAIYLAGFSINILTLLAIVLATGLVVDDAIVVLENIVRRRAEGLGPRAAAVH 439

Query: 427  GTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFSSLIALTLTPVLG 486
            GT EV FAV+ATT  L  VF+P+SF+ G  G LF EF  +LA +++ SS ++LTL P+L 
Sbjct: 440  GTLEVFFAVLATTATLAAVFVPLSFLPGQTGGLFREFGFVLAFSILLSSFVSLTLCPMLA 499

Query: 487  SKLLKANVKPGRFNQLIDRLFARLESGYRQVVSRAIRWRWAAPVVIAACIG-----GSYG 541
            S++L    +P   + ++ R   R  + YR  +   +     AP+++ A        G+ G
Sbjct: 500  SRMLTK--EPHEHDGVMQRFGRRASAFYRVTLRACLN----APLIVFAVAAFFTAAGALG 553

Query: 542  LMQLVPAQLTPSEDRGVIFSFVRGADATSYNRMAANMDLVEQRLMPLLGQGFLKS-FSIQ 600
             + L  ++LTP+EDR  +   +      S     A +  +E+ L PLL  G + + FSI 
Sbjct: 554  FLTL-KSELTPNEDRSQVMLRINAPQGVSLEYTQAQLRRIEEGLQPLLKSGEISNVFSIS 612

Query: 601  SPAFGGNAGDQTGFVIMILEDWNDRTVTAQEALSQVRKALAGIPDVRVFPFMPGFRG--G 658
                GG+A   +GF+++ L  W +R  T  + ++ + +A + IP VR F       G  G
Sbjct: 613  GQ--GGSAN--SGFMVLTLAPWEERERTQGQIVADINRATSKIPSVRAFTIQANSLGIRG 668

Query: 659  SNEPVQFVLGGSDYSELKTWAEKLEEEAEKSPFMTGADIDYSEKTPELVVTIDKQRAAEL 718
            +   +Q  L G+DY++L   A KL    E +       ++Y     +L VTID++RA++L
Sbjct: 669  AGSGLQVALVGNDYTKLGDAAAKLVRAMEDTGRFENVRLNYEANQAQLSVTIDRERASDL 728

Query: 719  GISVKSISDTLEVMLGGKKVTTFVERGEEYDVYLRGDENSFNNAADLSQIYMRTATGELV 778
            G+ +  +S  L+ ML G  V      GE Y V L       N+  DL  I+++   G +V
Sbjct: 729  GVDIGGLSWALQAMLDGSSVVDIFVEGEAYPVKLLSSTEPLNDPTDLQNIFVKAGDGRIV 788

Query: 779  TLDTVTRIDEVASAIRLAHYNKQKSVTITANLEAGYTLGQALDFLDQKAQEILPNDISVS 838
             + ++  ++E A A +L+  ++ ++V+++A L++   LG+AL  +++ A+ +LP    V 
Sbjct: 789  PMSSIATVEEKAVAPQLSRESQLRAVSLSAGLKSDLALGEALSMVEEMAEPLLPPGSRVM 848

Query: 839  YSGESKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPLVVMLTVPMGVFGGFLGLFV 898
               E+    EN + + + F  AL++ +LVLAAQFESF++ L++M TVP+G+      + V
Sbjct: 849  PLAEAATLDENANGLFVTFGFALVIIFLVLAAQFESFVSGLIIMSTVPLGLACAVFAMIV 908

Query: 899  MGQGMNIYSQIGMIMLIGMVTKNGILIVEFANQLRDRGVEFEKAIIDASARRLRPILMTA 958
             G  +NIYSQIG++ML+G++ KNGILIVEFANQLRDRG +   AI +A+  RLRP++MT 
Sbjct: 909  TGNTLNIYSQIGLVMLVGIMAKNGILIVEFANQLRDRGQDVRSAIENAANIRLRPVMMTM 968

Query: 959  FTTLAGSIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLLVIPAMYRLISGSTQAPGHV 1018
              T+ G++PL++++GAG E+RIA+G V+  G+G A +VTL + P  Y +I+  T+     
Sbjct: 969  IATVVGAVPLVLASGAGAEARIALGWVLVGGLGLAVVVTLYLTPVAYLVIARFTKPHADE 1028

Query: 1019 EAELNHEL 1026
            E +L  E+
Sbjct: 1029 ERKLQEEM 1036