Pairwise Alignments

Query, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1077 a.a., acriflavin resistance protein from Sinorhizobium meliloti 1021

 Score =  509 bits (1312), Expect = e-148
 Identities = 325/1025 (31%), Positives = 552/1025 (53%), Gaps = 25/1025 (2%)

Query: 3    LSDVSVKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIESQ 62
            +S++ + RP  A V+S++L + G+++ T+L + + PDI  P VSV+  Y GA A ++E+ 
Sbjct: 2    ISEIFIDRPRFAAVISIVLTLAGLIALTRLPIAQFPDIVPPQVSVTASYPGAGADVVEAT 61

Query: 63   ITSVLEDQLAGISGIDEITSVS-RNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLPE 121
            +   LE ++ G+  +  + S S  +G   +TVTF +G D +    ++++ VA A+  LP 
Sbjct: 62   VAQPLESKVVGVDNMLYMKSTSGADGTYSLTVTFAVGTDPDIATVNVQNRVALAEPVLPA 121

Query: 122  EADDP--QVFKNNGSGQASVYINLSSSEMDRTQLTDYIERVLLDRFSLISGVSSVDVSGG 179
            E       V K + S    + I+  + E D   L++Y    +LD    + GV    + G 
Sbjct: 122  EVKQSGVSVQKRSSSLMQVIAIHGENDEFDNLFLSNYATINVLDTIKRVPGVGDATLFGA 181

Query: 180  LYKVMYVRIKPELMAGRGVATSDISDALNKENLESP----GGQVRNDSTV--MSVRTARG 233
                M V +  + +   G+  +D+ +AL  +N+++     G Q   D  +  ++++T   
Sbjct: 182  QDYSMRVVLDIDRLTNLGLTPTDVINALKTQNVQAAIGRIGAQPMTDDPLFQLNIQTQGR 241

Query: 234  YQSAEDFEYLVVKRASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANP 293
                  FE +V++   DG+ + ++DVA V +G+ + +ST + +G     +G      AN 
Sbjct: 242  LTDPAQFEDVVLRAEPDGSFVRIRDVARVELGSVSADSTARINGKPVAMIGTYQAPGANA 301

Query: 294  LEVAKRVHEEVDKVQQFLPKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFI 353
            L   + V + ++++    P+G    + YD++ F++ S+  V  TL     LVI+V+++F+
Sbjct: 302  LAATEGVQQAMNRLAAAFPEGLTYTVSYDTSDFVQASVENVEHTLLEAFALVIIVVFLFL 361

Query: 354  GQLRATLIPAVTVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHH 413
            G  RA LIP + VPV+L+  F      GFS+N ++L+AL+L+IG+VVDDAIVVVEN+   
Sbjct: 362  GNWRAALIPLIAVPVALVGTFAVILAMGFSLNTVSLLALVLAIGIVVDDAIVVVENVERV 421

Query: 414  IERGEKPLLAAYKGTR----EVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAM 469
            +E  E P ++A +  R    E+  A++A TLVL+ VF+P++F+ G+ G LF +F+V +++
Sbjct: 422  ME--ENPGMSAAQAARLAMGEITGAIVAITLVLLSVFVPVAFIPGLSGQLFQQFAVAVSV 479

Query: 470  AVIFSSLIALTLTPVLGSKLLKANVKPGR-FNQLIDRLFARLESGYRQVVSRAIRWRWAA 528
            +++ S++ ALTL+P L + LLK +  P R     I R   R  +GY  V     R     
Sbjct: 480  SMVISAINALTLSPALCAILLKPHHGPKRGILGWISRGIDRTRNGYAHVAGSIARRAIIG 539

Query: 529  PVVIAACIGGSYGLMQLVPAQLTPSEDRGVIFSFVRGADATSYNRMAANMDLVEQRLMPL 588
             +++A  IG S  L ++VP    PSED+G  F+ +R  +  S+NR  A +  VE  L  +
Sbjct: 540  VILLAVAIGASGWLFRIVPTGFLPSEDQGAFFAEIRLPEGASFNRTDAVVREVETMLGGI 599

Query: 589  LGQGFLKSFSIQSPAFGGNAGDQTGFVIMILEDW---NDRTVTAQEALSQVRKALAGIPD 645
             G   + + +  S    G A   + F I+ ++ +    D + +   A+  V    A I +
Sbjct: 600  EGVANVTTVTGYS-FLDGIAKSSSAFAIVTMKPFAERQDESASVNAAIGTVMAKGAAIRN 658

Query: 646  VRVFPF----MPGFRGGSNEPVQFV-LGGSDYSELKTWAEKLEEEAEKSPFMTGADIDYS 700
             +VF F    + G   GS    Q + L G   +EL   A  L   A ++P +      YS
Sbjct: 659  AQVFAFNLPPIIGLGTGSGFEYQLLDLQGRSPAELAATAGGLMVAANQNPQLGPTFSTYS 718

Query: 701  EKTPELVVTIDKQRAAELGISVKSISDTLEVMLGGKKVTTFVERGEEYDVYLRGDENSFN 760
              +P+L + +D+ R   LG+SV  +  TL+  LG   V  F   G  + V ++  E   +
Sbjct: 719  ASSPQLYLNLDRDRLQALGVSVSDLFATLQGTLGSYYVNDFNLFGRSWKVTMQAAEADRD 778

Query: 761  NAADLSQIYMRTATGELVTLDTVTRIDEVASAIRLAHYNKQKSVTITANLEAGYTLGQAL 820
               D+S++++R A G++V + +V R+D +     +  YN  +S+T+      G + GQAL
Sbjct: 779  AVDDISRLHVRNAAGDMVPVASVARVDYIVGPQSIVRYNNYRSITLNGQPAPGISSGQAL 838

Query: 821  DFLDQKAQEILPNDISVSYSGESKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPLV 880
              ++Q +   LP   S  ++G +    E      ++ ALALL AYL L A +ES+  P+ 
Sbjct: 839  AAMEQVSAATLPPGYSFEWTGTALQELEAAGQTTVILALALLFAYLFLVALYESWTIPIP 898

Query: 881  VMLTVPMGVFGGFLGLFVMGQGMNIYSQIGMIMLIGMVTKNGILIVEFANQLRDRGVEFE 940
            V+L+V +GV G  + + V G   +IY+QIG+++LI + +KN ILIVEFA   R++G    
Sbjct: 899  VLLSVSVGVAGALVAVLVAGLSFDIYAQIGLVVLIALASKNAILIVEFAKFQREKGATIV 958

Query: 941  KAIIDASARRLRPILMTAFTTLAGSIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLLV 1000
             A ++ +  R R ++MT+F  + G IPL+ + GAG  SR AVGT +  GM  A+L+ + +
Sbjct: 959  DAAVEGARTRFRAVMMTSFAFIVGLIPLVTADGAGMLSRRAVGTGVAGGMLAASLLGIFI 1018

Query: 1001 IPAMY 1005
            IPA+Y
Sbjct: 1019 IPALY 1023