Pairwise Alignments

Query, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1029 a.a., Acriflavin resistance protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  594 bits (1532), Expect = e-174
 Identities = 347/1029 (33%), Positives = 571/1029 (55%), Gaps = 26/1029 (2%)

Query: 5    DVSVKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIESQIT 64
            D+ ++RPV A V+S+L+ V G  +  +L +R+ P++ + V++V+T Y GA++ +I+  +T
Sbjct: 5    DLFIRRPVLATVISLLILVVGFQALMRLPIRQYPEMSNTVITVTTTYPGANSDLIQGFVT 64

Query: 65   SVLEDQLAGISGIDEITSVSRNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLPEEAD 124
              ++  ++   G+D +TS S  G+S +     L  D +  ++++   V   +  LP   D
Sbjct: 65   QPIQKAVSTSKGLDYLTSSSSQGVSTVKAFVRLNEDPDAAMTEVTAKVNEVRSLLPRNVD 124

Query: 125  DPQVFKNNGSGQASVYINLSSSEMDRTQLTDYIERVLLDRFSLISGVSSVDVSGGLYKVM 184
            +P + K  G    + +I  SS    + Q+TDY+ RV+  + + +SGVS+ +V G     +
Sbjct: 125  NPVISKETGETFPAAFIAFSSKSHSQEQITDYVNRVIQPKLAAVSGVSNPEVFGAKNFSI 184

Query: 185  YVRIKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTVMSVRTARGYQSAEDFEYLV 244
             V + PE MA +G+  SD+  AL   N  S  G ++    +++ +         +F  LV
Sbjct: 185  RVWLDPEKMAQQGLTASDVQTALTANNFSSAAGSIKGSLDIINTKAETDLTDIAEFRKLV 244

Query: 245  VKRASDGTP-IYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAKRVHEE 303
            V+  +DG   I L+D+ +V + AE+ + +  + G   + +G+    +ANPL V   + E 
Sbjct: 245  VR--NDGARLIRLQDIGEVSLAAESSDMSVFASGQAAIFVGVFTTPEANPLSVIAEIRET 302

Query: 304  -VDKVQQFLPKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQLRATLIP 362
             +  +   LP+G    + YDSTVFI  SI EV  T+     +V++V+++F+G +R+ +IP
Sbjct: 303  ALPAIIDQLPEGMTALMAYDSTVFITESIREVVKTIVEAAIIVMVVIFLFMGSVRSVVIP 362

Query: 363  AVTVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIERGEKPLL 422
             VTVP+SL+   +     GFSINL+TL+A++L+IGLVVDDAIVVVEN+  HIE G  P  
Sbjct: 363  LVTVPLSLVGVAILLMVLGFSINLLTLLAMVLAIGLVVDDAIVVVENVHRHIEEGSTPFQ 422

Query: 423  AAYKGTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFSSLIALTLT 482
            AA  GTRE+   VI+ T+ L  V+ PI+FM G+ G LF EF++ LA +V+ S ++ALTL+
Sbjct: 423  AAIDGTREIALPVISMTITLAAVYAPIAFMGGLTGALFREFALALAGSVVVSGVVALTLS 482

Query: 483  PVLGSKLLKANVKPGRFNQLIDRLFARLESGYRQVVSRAIRWRWAAPVVIAACIGGSYGL 542
            P++ SK+L+  V    F   +D LF RL+  Y +++  ++  R    V     +G  Y L
Sbjct: 483  PMMCSKILRHEVTKKGFAAKLDSLFERLQGRYGRLLDASLADRPTTVVFALIVMGSLYFL 542

Query: 543  MQLVPAQLTPSEDRGVIFSFVRGADATSYNRMAANMDLVEQ--RLMPLLGQGFLKSFSIQ 600
               +P++L P ED+G + +   G  + S + M   +  ++   R  P     FL      
Sbjct: 543  FSAIPSELAPDEDQGAVLTAFNGPASASNDYMNVFVHQIDDALRAYPETEHTFL------ 596

Query: 601  SPAFGGNAGDQTGFVIMILEDWNDRTVTAQEALSQVRKALAGIPDVRVFPFMP-GFRGGS 659
                 G     +GF    L+ W +R   A+  +  V+  + GI  V+   F P    G  
Sbjct: 597  ---IAGIGTPNSGFGGASLKPWAERERDAKALIGAVQTTMNGIAGVKASVFSPAALPGAD 653

Query: 660  NEPVQFVLGG-SDYSELKTWAEKLEEEAEKSPFMTGADIDYSEKTPELVVTIDKQRAAEL 718
              PVQFV+   + Y  +    +++ + A+ S      D D   ++P+ VV++D+ +AA  
Sbjct: 654  GLPVQFVISSTTPYEAISDIQDEMMKRAQASGRFIFTDTDLKFESPQTVVSVDRDKAAAY 713

Query: 719  GISVKSISDTLEVMLGGKKVTTFVERGEEYDVYLRGDENSFNNAADLSQIYMRTATGELV 778
            GI++  I   L  M GG  V     +G  Y V  +  +++  +   L + Y+RT +G  +
Sbjct: 714  GITMDQIGGALATMTGGNYVNLVNIQGRSYKVIPQVPDSARMDPDSLGRFYIRTHSGTAI 773

Query: 779  TLDTVTRIDEVASAIRLAHYNKQKSVTITANLEAGYTLGQALDFLDQKAQEILPNDISVS 838
             L ++  ++       L  +N+  + TI+     G TLGQAL  L+Q A E+LP+  ++ 
Sbjct: 774  PLSSLVTLERRVLPQSLNQFNQLNAFTISGFPMPGVTLGQALAVLEQSAAEVLPSGYTID 833

Query: 839  YSGESKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPLVVMLTVPMGVFGGFLGLFV 898
            Y+G+S+ F +  SS+   F  AL++ +LVLAAQFESF +PLV+M++VP+ + G  L L +
Sbjct: 834  YAGQSRQFIQEGSSLIGTFVFALIIIFLVLAAQFESFRDPLVIMISVPLSICGALLPLAL 893

Query: 899  MGQGMNIYSQIGMIMLIGMVTKNGILIVEFANQLR-DRGVEFEKAIIDASARRLRPILMT 957
                MNIY+Q+G++ LIG++TK+GIL+ E A + + ++G+   +AI  A+  RLRPILMT
Sbjct: 894  GATTMNIYTQVGLVTLIGLITKHGILMCEVARERQEEQGLTRAQAIEVAAKLRLRPILMT 953

Query: 958  AFTTLAGSIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLLVIPAMYRLIS-------- 1009
                +AG IPL+ ++GAG  SR ++  VI  GM   TL TL V+P +Y  ++        
Sbjct: 954  TAAMVAGLIPLMFASGAGANSRFSIAVVIVAGMSIGTLFTLFVLPVIYTFLAEDRSKGRD 1013

Query: 1010 GSTQAPGHV 1018
            GS+ A G V
Sbjct: 1014 GSSGAEGGV 1022