Pairwise Alignments

Query, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1037 a.a., Acriflavin resistance protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  794 bits (2051), Expect = 0.0
 Identities = 429/1035 (41%), Positives = 645/1035 (62%), Gaps = 7/1035 (0%)

Query: 1    MWLSDVSVKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIE 60
            M +S + ++RPV A VLS+LL V G+ + T+LAVRE+PDI+S VVSV+T Y GA+  I++
Sbjct: 1    MDVSSLFIRRPVFATVLSLLLVVMGIAAMTRLAVRELPDIDSAVVSVTTPYTGAAPEIVD 60

Query: 61   SQITSVLEDQLAGISGIDEITSVSRNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLP 120
            + IT V+E+ +AG+SGI  ITS SR G  R  + FE G  ++  V+D+RDAVA+ +  LP
Sbjct: 61   TDITEVIENAVAGVSGIRTITSQSRRGQGRTVIEFESGVSMDEAVNDVRDAVAKVRGDLP 120

Query: 121  EEADDPQVFKNNGSGQASVYINLSSSEMDRTQLTDYIERVLLDRFSLISGVSSVDVSGGL 180
            ++ ++P++ K++      + ++L+S  M   +LTD+ +R ++DR + I GV+ VD+ G  
Sbjct: 121  DDIEEPRIAKSDTDSDPVMRLSLTSPRMTPIELTDFADRYIVDRLATIDGVAQVDLYGER 180

Query: 181  YKVMYVRIKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTVMSVRTARGYQSAEDF 240
             + + + +    MA R V   D+  AL + N+E P G++ + S +++VR A    S E F
Sbjct: 181  RQAIRLWLDRRAMAARQVTVQDVEAALRRANVELPAGEIESASRLLTVRAATLLTSPEAF 240

Query: 241  EYLVVKRASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAKRV 300
               V+K   DG P+ ++DVA V +G EN+++T + +G   ++MG++ QS AN + ++ R+
Sbjct: 241  GSTVIK-VVDGYPLRVRDVARVELGVENDDTTVRVEGRDALTMGVLRQSQANTVAISNRI 299

Query: 301  HEEVDKVQQFLPKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQLRATL 360
              E+D+++  LP+G  L +  D  +FI RSI EV  TL ++G +VI+V + F+G +RATL
Sbjct: 300  RAEIDRLRPSLPEGMSLEVSSDDALFINRSIHEVILTLGLSGLIVIIVNFAFLGSIRATL 359

Query: 361  IPAVTVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIERGEKP 420
            +P VT+PV++I  F+     GFSINL+TL+ALILSIGLVVDDAIVV+ENI   IE GE  
Sbjct: 360  VPTVTIPVAVIGTFIGILLLGFSINLLTLLALILSIGLVVDDAIVVLENIQRRIEAGEPK 419

Query: 421  LLAAYKGTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFSSLIALT 480
            L+AA +GTR+V FAV+AT+L L+ VF+PISFM+G VG LFTEF  +LA AV  S L+ALT
Sbjct: 420  LVAAARGTRQVTFAVVATSLTLIAVFVPISFMEGTVGRLFTEFGFVLACAVAISMLVALT 479

Query: 481  LTPVLGSKLLKANVKPGRFNQLIDRLFARLESGYRQVVSRAIRWRWAAPVVIAACIGGSY 540
            L P L + +L      GR    ++  F  L  GY++ +S  +        V   C G S+
Sbjct: 480  LCPPLAAGVLAEGKAEGRLAHALNYAFGTLSRGYQRALSAVLGLPMVVLTVALLCGGASF 539

Query: 541  GLMQLVPAQLTPSEDRGVIFSFVRGADATSYNRMAANMDLVEQRLMPLLGQGFLKSFSIQ 600
             L Q +P +L P EDRGV+   + G    +       +  VE  + P+L +G       Q
Sbjct: 540  WLYQGLPKELVPVEDRGVVVVSLNGPQGANTRYTDTQIRAVEAAVQPVLDRGEAVGVLAQ 599

Query: 601  SPAFGGNAGDQTGFVIMILEDWNDRTVTAQEALSQVRKALAGIPDVRVFPFMPGFRG--G 658
                G       G+V++ L+DW +R  TA      +RK L  +      P +P   G  G
Sbjct: 600  ---VGQWNRPHRGYVVIRLDDWENRGRTASALAESLRKDLGKLAGATATPVVPAGLGLRG 656

Query: 659  SNEPVQFVLGGSDYSELKTWAEKLEEEAEKSPFMTGADIDYSEKTPELVVTIDKQRAAEL 718
            S  P+Q V+GG DY+E++ WA  L + AE+ P +   ++D+ +  P+L V ID+ RA +L
Sbjct: 657  SRTPLQVVIGGPDYAEVEVWANALLKRAEELPGLINPELDFEQNQPQLSVGIDRDRADDL 716

Query: 719  GISVKSISDTLEVMLGGKKVTTFVERGEEYDVYLRGDENSFNNAADLSQIYMRTAT-GEL 777
            G+ V++I  TL+ ML  ++VT FV+RG EY V ++         +DLS  ++R    G L
Sbjct: 717  GVGVEAIGQTLQTMLASREVTRFVDRGREYQVVVQARPEDRRTPSDLSNTFVRAEKGGAL 776

Query: 778  VTLDTVTRIDEVASAIRLAHYNKQKSVTITANLEAGYTLGQALDFLDQKAQEILPNDISV 837
            V LD +  + E A A  L  Y +  S+T+ + L  GY +GQA+D +   A + +P +  +
Sbjct: 777  VPLDALVILKETAGAPDLNRYARLPSITLQSALAPGYDMGQAIDDVMALASQTVPPEARL 836

Query: 838  SYSGESKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPLVVMLTVPMGVFGGFLGLF 897
            S +G+SK+F E    V   F +AL++ YLVLAAQFESF++PL++ML+VP+ V G  L L+
Sbjct: 837  SLAGQSKEFLETSGGVLFTFLMALVIVYLVLAAQFESFLHPLIIMLSVPLAVSGALLSLW 896

Query: 898  VMGQGMNIYSQIGMIMLIGMVTKNGILIVEFANQLRDRGVEFEKAIIDASARRLRPILMT 957
              G  +N+YSQIG+++LIG+  KNGILIVEFANQLRD G    +AI++A++ RLRPILMT
Sbjct: 897  ATGNSINVYSQIGIVLLIGLTAKNGILIVEFANQLRDEGRSVREAILEAASLRLRPILMT 956

Query: 958  AFTTLAGSIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLLVIPAMYRLISGSTQAPGH 1017
               T+ G++PL  S+GAG ESR A+G V+  G+G A+L+TL V P +Y L++  T++ G 
Sbjct: 957  VICTILGAVPLAWSSGAGAESREAIGIVVIGGLGLASLLTLFVTPVLYDLLAPFTRSAGA 1016

Query: 1018 VEAELNHELQQDVKG 1032
            V   L+  L +  +G
Sbjct: 1017 VGQALDRALAETPEG 1031