Pairwise Alignments

Query, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1042 a.a., acriflavin resistance protein (RefSeq) from Shewanella loihica PV-4

 Score =  944 bits (2440), Expect = 0.0
 Identities = 502/1032 (48%), Positives = 697/1032 (67%), Gaps = 4/1032 (0%)

Query: 1    MWLSDVSVKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIE 60
            M L+D+SVKRPV A V+SMLL  FG+VSF KL +RE P+I+ P+VSV T Y+GASA ++E
Sbjct: 1    MILTDLSVKRPVFASVISMLLIAFGLVSFDKLPLREYPNIDPPIVSVQTNYRGASAAVVE 60

Query: 61   SQITSVLEDQLAGISGIDEITSVSRNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLP 120
            S+IT ++ED+++G+ GI  I S S +G S +T+ F++G D+    +D+RD ++    +LP
Sbjct: 61   SRITQLVEDRISGVEGIRNINSSSSDGRSSVTLEFDVGRDIEAAANDVRDRISGLLNNLP 120

Query: 121  EEADDPQVFKNNGSGQASVYINLSSSEMDRTQLTDYIERVLLDRFSLISGVSSVDVSGGL 180
            EEAD P+V K NG  +  +++NL S +M+  QLTDY  R L+DRFS+I GV+++ + GG 
Sbjct: 121  EEADPPEVQKANGGDEVIMWLNLVSDQMNTLQLTDYARRYLVDRFSVIDGVANIRIGGGK 180

Query: 181  YKVMYVRIKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTVMSVRTARGYQSAEDF 240
               M V I  + +A R +  SDI   L  EN+E P G V +     +VR  R +++AEDF
Sbjct: 181  VYAMRVWIDRQALAARNLTVSDIESVLRSENVELPAGSVESQDRHFTVRLERTFKTAEDF 240

Query: 241  EYLVVKRASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAKRV 300
              LV+    DG  I L DVA V IG+E E  TF+ +    + +GI  QS +N LEVA+  
Sbjct: 241  NNLVLAEGEDGYLIKLGDVARVEIGSEEERITFRGNREAMIGLGISKQSTSNTLEVARAA 300

Query: 301  HEEVDKVQQFLPKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQLRATL 360
            +  VDK+   LP G  +   YDS+VFIE SI EVY TLFI   LVI+V+Y+F+G +RA L
Sbjct: 301  NALVDKINPTLPAGMEIKRSYDSSVFIEASIKEVYQTLFIAMFLVIVVIYLFLGSVRAML 360

Query: 361  IPAVTVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIERGEKP 420
            IPA+TVPVSL++ F+  Y  G++INL+TL+A+IL+IG+VVDDAIVV+ENI   IE G+ P
Sbjct: 361  IPALTVPVSLMATFIVLYALGYTINLLTLLAMILAIGMVVDDAIVVLENIHRRIEEGDSP 420

Query: 421  LLAAYKGTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFSSLIALT 480
            L AAY G+REV FAV+ATTLVLV VF+PI+F++G +G LF EF+V ++ AVIFSSL+ALT
Sbjct: 421  LKAAYLGSREVAFAVVATTLVLVAVFMPITFLEGDLGKLFKEFAVAMSAAVIFSSLVALT 480

Query: 481  LTPVLGSKLLKANVKPGRFNQLIDRLFARLESGYRQVVSRAIRWRWAAPVVIAACIGGSY 540
            L+P++ SKLLK   +     + ID     L +GYR  + RA+   +    ++   +G S 
Sbjct: 481  LSPMMCSKLLKPAGQDPWLVRKIDAGMNWLSAGYRATLKRAMIHPFIVSSLVVIALGLSG 540

Query: 541  GLMQLVPAQLTPSEDRGVIFSFVRGADATSYNRMAANMDLVEQRLMPLLGQGFLKSFSIQ 600
             LM  VP +  P EDRG +F  V G    S+  ++  MD +E RLMPL+  G +K   I+
Sbjct: 541  YLMTKVPQEFAPQEDRGSMFLIVNGPQGASFEYISPYMDEIENRLMPLVDSGDIKRLLIR 600

Query: 601  SP-AFGGNAGDQTGFVIMILEDWNDRTVTAQEALSQVRKALAGIPDVRVFPFM-PGFRGG 658
            +P  FG +A    G  I++LEDW DR  +A E +  +R  L+ +  VR FP M   F  G
Sbjct: 601  APRGFGRSANFSNGMAIIVLEDWADRR-SAFEIIGDIRARLSDLAGVRAFPVMRQAFGRG 659

Query: 659  SNEPVQFVLGGSDYSELKTWAEKLEEEAEKSPFMTGADIDYSEKTPELVVTIDKQRAAEL 718
              +PVQFVLGG  Y EL  W + L E+A+++P + G D DY E  P+L V IDK RAA+L
Sbjct: 660  VGKPVQFVLGGPSYEELAKWRDILLEKAKENPNLVGLDHDYQETKPQLRVVIDKDRAADL 719

Query: 719  GISVKSISDTLEVMLGGKKVTTFVERGEEYDVYLRGDENSFNNAADLSQIYMRT-ATGEL 777
            G+S+  I  TLE MLG + VTTF+  GEEYDV + G+ ++ N A+DLS IY+R+  + EL
Sbjct: 720  GVSISHIGRTLESMLGSRLVTTFMRDGEEYDVIIEGNRDNQNTASDLSNIYVRSDRSREL 779

Query: 778  VTLDTVTRIDEVASAIRLAHYNKQKSVTITANLEAGYTLGQALDFLDQKAQEILPNDISV 837
            + L  +  ++E A A +L  YN+ +++TI ANL  GY+LG+ALD+L+  A   LP +  +
Sbjct: 780  IPLANLVSVEEFADASQLNRYNRMRAITIEANLADGYSLGEALDYLNNLAYTYLPAEAVI 839

Query: 838  SYSGESKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPLVVMLTVPMGVFGGFLGLF 897
            SY G+S D++E+ SS+  VF LAL + +LVLAAQFES+I+P+V+MLTVP+   G  +GL+
Sbjct: 840  SYKGQSLDYQESGSSMYFVFLLALGIVFLVLAAQFESYIHPMVIMLTVPLATLGALIGLW 899

Query: 898  VMGQGMNIYSQIGMIMLIGMVTKNGILIVEFANQLRDRGVEFEKAIIDASARRLRPILMT 957
            V GQ +NIYSQIG+IML+G+  KNGILIVEFANQLRD+G+EF+ AII A+++RLRPILMT
Sbjct: 900  VTGQSLNIYSQIGIIMLVGLAAKNGILIVEFANQLRDKGIEFDTAIIQAASQRLRPILMT 959

Query: 958  AFTTLAGSIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLLVIPAMYRLISGSTQAPGH 1017
              TT AG+IPL+++ GAG E+R  +G V+  G+  AT  TLLVIP  Y LI+ +T +P  
Sbjct: 960  GITTAAGAIPLVLAQGAGAETRFVIGVVVLSGIILATFFTLLVIPVAYGLIARNTGSPEE 1019

Query: 1018 VEAELNHELQQD 1029
            +   L+ EL QD
Sbjct: 1020 ISQRLDAELAQD 1031