Pairwise Alignments

Query, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1044 a.a., hydrophobe/amphiphile efflux-1 (HAE1) family transporter from Dechlorosoma suillum PS

 Score =  526 bits (1355), Expect = e-153
 Identities = 324/1025 (31%), Positives = 546/1025 (53%), Gaps = 20/1025 (1%)

Query: 3    LSDVSVKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIESQ 62
            +S   + RP+ A V+S+++ + G+++   L + + P+I  P V +S  Y GASA  +   
Sbjct: 1    MSRFFINRPIFASVISIVIVIAGIMASRVLPISQYPEIAPPTVIISASYPGASAETLAKT 60

Query: 63   ITSVLEDQLAGISGIDEITSV-SRNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLPE 121
            + + +E+QL+G+  +    S  S NG   IT TFE+G D++    ++ + V  A+  LP+
Sbjct: 61   VAAPIEEQLSGVENLMYFNSTASANGSLSITATFEVGTDVDMATVNVNNRVKIAEPRLPD 120

Query: 122  EADDPQVFKNNGSGQASVYINLSSSEMDRTQL--TDYIERVLLDRFSLISGVSSVDVSGG 179
                  V     S    +   ++S E  RT L  ++Y    +LD    I GV    + G 
Sbjct: 121  VVRQYGVTVQKRSNDILMVAAITSPEGTRTPLYLSNYALVNILDDLKRIPGVGDAQIFGA 180

Query: 180  LYKVMYVRIKPELMAGRGVATSDISDALNKENLESPGGQVR-----NDSTVMSVRTARG- 233
            L   M + ++P+ MA  GV T++IS+A+  +N ++  G++      N   ++   TA+G 
Sbjct: 181  LDYSMRLWLRPDRMAQLGVTTTEISNAIAAQNKQNAAGKIGQEPAPNGQQLVYTVTAKGR 240

Query: 234  YQSAEDFEYLVVKRASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANP 293
              + E F  +V++       +YLKDVA V +GA+N +++    G   V +GI  QS AN 
Sbjct: 241  LTTPEQFGNIVIRADGPKGALYLKDVARVELGAQNYDASTALMGKPVVGVGIFLQSGANA 300

Query: 294  LEVAKRVHEEVDKVQQFLPKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFI 353
            L+VAK+V   +D+++Q  P      + +D+T F++ SI+EV  TL     LV +V+++F+
Sbjct: 301  LDVAKKVKLRMDELKQKFPSDVDYVVPFDTTKFVQASITEVVHTLVEALVLVAIVVFVFL 360

Query: 354  GQLRATLIPAVTVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHH 413
               RAT+IP V VPVSLI  F   + FGFSIN +TL A++L+IG+VVDDAIVV+EN+   
Sbjct: 361  QNWRATVIPLVAVPVSLIGTFAGLWLFGFSINTLTLFAMVLAIGIVVDDAIVVLENVERL 420

Query: 414  I-ERGEKPLLAAYKGTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVI 472
            + E    P  AA +  REV  AV+A  LVL  VF+P++F+ G+ G+L+ +F+V +A++V 
Sbjct: 421  MWEEKMAPKEAAIEAMREVSSAVVAIVLVLCAVFIPVAFLGGIAGMLYKQFAVTVAISVT 480

Query: 473  FSSLIALTLTPVLGSKLLKANVKPGRFNQLIDRLFARLESGYRQVVSRAIRWRWAAPVVI 532
             S ++ALTLTP L + LL+   +     +  +RLF R    Y   V++ +  R    V  
Sbjct: 481  LSGIVALTLTPALCALLLQPKHEEPAIFRPFNRLFERFTKSYTDTVNKTLHHRIIGTVAC 540

Query: 533  AACIGGSYGLMQLVPAQLTPSEDRGVIFSFVRGADATSYNRMAANMDLVEQRLMPLLGQG 592
               +GGS+ + + VP    P+ED+G + S +   D  S  R  A  D  +  +     + 
Sbjct: 541  VVILGGSFFMFRAVPGGFVPAEDQGYLISALMLPDGASLQRTRATGDQFQSMIKQ--DEA 598

Query: 593  FLKSFSIQ-SPAFGGNAGDQTGFVIMILEDWNDRTVTAQEALSQVRKALAGIPDVRVFPF 651
              + F I  +   GG      G V + L+DW++R   A +   +       +PD     F
Sbjct: 599  VDRVFVIAGNDIIGGGMKPNAGTVFIPLKDWDERKAGADDLAKKFMGMGMMLPDGLGLVF 658

Query: 652  MP------GFRGGSNEPVQFVLGGSDYSELKTWAEKLEEEAEKSPFMTGADIDYSEKTPE 705
             P      G  GG    +Q   G +D  +L    ++  E  +K   + G +  +   +P+
Sbjct: 659  NPPAIRGLGNAGGFEAYIQ-ARGDADPQKLSGVVQQFMEGLKKRQELVGINTFFRPTSPQ 717

Query: 706  LVVTIDKQRAAELGISVKSISDTLEVMLGGKKVTTFVERGEEYDVYLRGDENSFNNAADL 765
            L V +++ +A  +GI+V  +  TL+  +G   V  F   G  Y V L+ D    +   DL
Sbjct: 718  LSVEVNEAKAISMGIAVSDVYQTLQATMGTLYVNDFNLNGRTYRVQLQADGQFRSKPEDL 777

Query: 766  SQIYMRTATGELVTLDTVTRIDEVASAIRLAHYNKQKSVTITANLEAGYTLGQALDFLDQ 825
             ++Y+++++G +V +  + ++  V    +L  +N   S  +  +     + G A+  +++
Sbjct: 778  GRVYVKSSSGSMVPVSALIKVKSVVGPEQLERFNGFLSAKVMGSSVPKVSTGDAIKIVEE 837

Query: 826  KAQEILPNDISVSYSGESKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPLVVMLTV 885
             A+E LP    + ++G++   K   ++ A+ F   +++ +L+LAAQ+E +  PL V+L V
Sbjct: 838  VAKETLPAGYELEWTGQAFQEKRTGTTSAVAFGFGIIMVFLILAAQYEKWSLPLAVILAV 897

Query: 886  PMGVFGGFLGLFVMGQGMNIYSQIGMIMLIGMVTKNGILIVEFANQLRDRGVEFEKAIID 945
            P  +FG    + + G   +IY QIG+++LIG+  KN ILIVEFA Q R  G+   +A ++
Sbjct: 898  PFALFGALAAVMIRGMPNDIYFQIGLVVLIGLAAKNAILIVEFAAQKRAEGLGVLEAALE 957

Query: 946  ASARRLRPILMTAFTTLAGSIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLLVIPAMY 1005
             +  R RPI+MT+   + G  PL+ +TGAG  +R ++GT +F GM  AT +  + IP  +
Sbjct: 958  GARLRFRPIVMTSLAFILGVFPLVKATGAGAAARKSMGTGVFGGMLAATFIATIFIPMFF 1017

Query: 1006 RLISG 1010
              +SG
Sbjct: 1018 TWLSG 1022