Pairwise Alignments

Query, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1040 a.a., multidrug transporter subunit MdtB from Klebsiella michiganensis M5al

 Score =  502 bits (1292), Expect = e-146
 Identities = 300/1013 (29%), Positives = 539/1013 (53%), Gaps = 13/1013 (1%)

Query: 4    SDVSVKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIESQI 63
            S + + RPVA  +L + + + G++ +  L V  +P+++ P + V T Y GAS  ++ S +
Sbjct: 13   SRLFIMRPVATTLLMVAIMLAGIIGYRFLPVSALPEVDYPTIQVVTLYPGASPDVMTSSV 72

Query: 64   TSVLEDQLAGISGIDEITSVSRNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLPEEA 123
            T+ LE Q   +SG+ +++S S  G S +T+ F+L   L+    +++ A+  A   LP + 
Sbjct: 73   TAPLERQFGQMSGLKQMSSQSSGGASVVTLQFQLTLPLDVAEQEVQAAINAATNLLPSDL 132

Query: 124  DDPQVF-KNNGSGQASVYINLSSSEMDRTQLTDYIERVLLDRFSLISGVSSVDVSGGLYK 182
             +P V+ K N +    + + ++SS +  TQ+ D +E  +  + S +SGV  V ++GG   
Sbjct: 133  PNPPVYSKVNPADPPIMTLAVTSSAVPMTQVEDMVETRVAQKISQVSGVGLVTLAGGQRP 192

Query: 183  VMYVRIKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTVMSVRTARGYQSAEDFEY 242
             + V++  + +A  G+ +  +  A+   N+ S  G +   S  +++      QSAED+  
Sbjct: 193  AVRVKLNAQAIAALGLTSETVRTAITSANVNSAKGSLDGPSRAVTLSANDQMQSAEDYRR 252

Query: 243  LVVKRASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAKRVHE 302
            L++    +G PI L DVA V  GAEN      ++    + M +  Q  AN +  A  + +
Sbjct: 253  LIIAW-QNGAPIRLGDVATVEQGAENSWLGAWANNQRAIVMNVQRQPGANIISTADSIRQ 311

Query: 303  EVDKVQQFLPKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQLRATLIP 362
             + ++ + LPK  ++ +  D T  I  S+S+    L +   LV++++Y+F+  + AT+IP
Sbjct: 312  MLPQLTESLPKSVKVQVLSDRTTNIRASVSDTQFELMLAIALVVMIIYVFLRNVPATIIP 371

Query: 363  AVTVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIERGEKPLL 422
             + VP+SL+  F    +  FSIN +TLMAL ++ G VVDDAIVV+ENI  +IE+GEKPL 
Sbjct: 372  GIAVPLSLVGTFAVMVFLDFSINNLTLMALTIATGFVVDDAIVVIENISRYIEKGEKPLA 431

Query: 423  AAYKGTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFSSLIALTLT 482
            AA KG  E+GF +I+ T  L+ V +P+ FM  +VG LF EF++ LA+A++ S++++LTLT
Sbjct: 432  AALKGAGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAITLAVAILISAVVSLTLT 491

Query: 483  PVLGSKLL--KANVKPGRFNQLIDRLFARLESGYRQVVSRAIRWRWAAPVVIAACIGGSY 540
            P++ +++L  ++  K  RF++  +R F R+ + Y + +SR +   W    V  + +  S 
Sbjct: 492  PMMCARMLSHESLRKQNRFSRASERFFERVIAVYGRWLSRVLNHPWLTLSVALSTLALSI 551

Query: 541  GLMQLVPAQLTPSEDRGVIFSFVRGADATSYNRMAANMDLVEQRLMPLLGQGFLKSFSIQ 600
             L   +P    P +D G+I   ++   + S+  MA     V   ++       L SF   
Sbjct: 552  MLWVFIPKGFFPIQDNGIIQGTLQAPQSASFANMAERQQQVSAAILKDPAVESLTSF--- 608

Query: 601  SPAFGGNAGDQTGFVIMILEDWNDRTVTAQEALSQVRKALAGIPDVRVF----PFMPGFR 656
                G N    +  + + L+  ++R    Q  + +++ A++GIP V ++      +    
Sbjct: 609  VGVDGTNPALNSARLQINLKPLDERDDRVQTVIGRLQNAVSGIPGVELYLQPTQDLTIDT 668

Query: 657  GGSNEPVQFVLGGSDYSELKTWAEKLEEEAEKSPFMTGADIDYSEKTPELVVTIDKQRAA 716
              S    QF L  +    L  W  +L    +  P ++    D+ +K     + +D+  A+
Sbjct: 669  TVSRTQYQFTLQANSLDALSNWVPQLLARLQALPQLSDVSSDWQDKGLAAYINVDRDSAS 728

Query: 717  ELGISVKSISDTLEVMLGGKKVTTFVERGEEYDVYLRGDENSFNNAADLSQIYMRTATGE 776
             LGIS+  + + L    G + ++T   +  +Y V L  D  +    A L  I + ++ G 
Sbjct: 729  RLGISMADVDNALYNAFGQRLISTIYTQANQYRVVLEHDTQATPGLAALDNIRLTSSDGG 788

Query: 777  LVTLDTVTRIDEVASAIRLAHYNKQKSVTITANLEAGYTLGQALDFLDQKAQEI-LPNDI 835
            +V L  + ++++  + + + H ++    TI+ N+   Y+LG A++ +    Q +  P+DI
Sbjct: 789  IVPLTAIAKVEQRFAPLSINHLDQFPVTTISFNVPDNYSLGDAVEAILSAEQALDFPSDI 848

Query: 836  SVSYSGESKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPLVVMLTVPMGVFGGFLG 895
               + G S  F+    S   +   A++  Y+VL   +ESFI+P+ ++ T+P    G  L 
Sbjct: 849  RTQFQGSSLAFQSALGSTVWLVVAAVVAMYIVLGVLYESFIHPITILSTLPTAGVGALLA 908

Query: 896  LFVMGQGMNIYSQIGMIMLIGMVTKNGILIVEFANQL-RDRGVEFEKAIIDASARRLRPI 954
            L++ G  +++ + IG+I+LIG+V KN I++++FA    R++G+   +AI  A   R RPI
Sbjct: 909  LWLAGSELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMPPREAIYQACLLRFRPI 968

Query: 955  LMTAFTTLAGSIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLLVIPAMYRL 1007
            LMT    L G++PL++STG G E R  +G  +  G+  + ++TL   P +Y L
Sbjct: 969  LMTTLAALFGALPLMLSTGVGAELRRPLGIGMVGGLMLSQVLTLFTTPVIYLL 1021