Pairwise Alignments

Query, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1037 a.a., Multidrug export protein AcrF from Enterobacter sp. TBS_079

 Score =  478 bits (1230), Expect = e-138
 Identities = 323/1039 (31%), Positives = 524/1039 (50%), Gaps = 44/1039 (4%)

Query: 3    LSDVSVKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIESQ 62
            +++  ++RPV A VL+++L + G ++  KL + + P I  P V+++  Y GA A  ++  
Sbjct: 1    MANFFIQRPVFAWVLAIILMIAGGLAILKLPIAQYPTIAPPAVAITATYPGADAQTVQDT 60

Query: 63   ITSVLEDQLAGISGIDEITSVSRN-GMSRITVTFELGYDLNTGVSDIRDAVARAQRSLPE 121
            +T V+E  + GI  +  ++S S + G   IT+TF+ G D +     +++ +  A   LP+
Sbjct: 61   VTQVIEQNMNGIDNLMYMSSTSDSAGNVTITLTFQSGTDPDIAQVQVQNKLQLAMPLLPQ 120

Query: 122  EADDPQVFKNNGSGQASVYINLSSSEMDRTQ--LTDYIERVLLDRFSLISGVSSVDVSGG 179
            E     +     S    +     S   D TQ  ++DY+   + D  S  +GV  V + G 
Sbjct: 121  EVQQQGIGVEKSSSSFLLVAGFVSDNKDLTQDDISDYVASNVKDAISRTTGVGDVQLFGA 180

Query: 180  LYKVMYVRIKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTV------MSVRTARG 233
             Y  M + +    M    +   D+ + L  +N +   GQ+    +V       S+     
Sbjct: 181  QY-AMRIWLDSNAMNKYQLTPLDVINQLKTQNDQIAAGQLGGTPSVPGQQLNASIIAQTR 239

Query: 234  YQSAEDFEYLVVKRASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANP 293
             +S E+F  + +K   DG+ ++LKDVA + +G EN N   K +G     +GI   + AN 
Sbjct: 240  LKSPEEFGRVTLKVNQDGSMVHLKDVARIELGGENYNMVTKINGQAATGLGIKLATGANA 299

Query: 294  LEVAKRVHEEVDKVQQFLPKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFI 353
            L+ A  +  ++ ++QQF P+G ++   YD+T F++ SI EV  TLF    LV LV+Y+F+
Sbjct: 300  LDTAAAIKSKLAQLQQFFPQGLKVVYPYDTTPFVKISIHEVVKTLFEAIILVFLVMYLFL 359

Query: 354  GQLRATLIPAVTVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFH- 412
              LRATLIP + VPV L+  F     FGFSIN +T+  ++L+IGL+VDDAIVVVEN+   
Sbjct: 360  QNLRATLIPTIAVPVVLLGTFAILAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERV 419

Query: 413  HIERGEKPLLAAYKGTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVI 472
             +E    P  A  K   ++  A++   +VL  VF+P++F  G  G ++ +FS+ +  A+ 
Sbjct: 420  MVEDKLPPKEATQKSMGQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSLTIVSAMA 479

Query: 473  FSSLIALTLTPVLGSKLLK-----ANVKPGRFNQLIDRLFARLESGYRQVVSRAIRWRWA 527
             S L+AL LTP L + LLK      + K G F    + LF R    Y   VS  +R    
Sbjct: 480  LSVLVALILTPALCATLLKPVSSDRHEKKGGFFGWFNALFDRSVEHYSNSVSGILRKTGR 539

Query: 528  APVVIAACIGGSYGLMQLVPAQLTPSEDRGVIFSFVRGADATSYNRMAANMDLVEQRLMP 587
              VV    +GG   L   +P    P ED+GV  + V+     +  R    +D V+   + 
Sbjct: 540  YLVVYVIIVGGMAVLFLRLPTSFLPEEDQGVFMTMVQLPAGATQMRTQQVLDQVQNYYLN 599

Query: 588  LLGQGFLKSFSIQSPAFGGNAGDQTGFVIMILEDWNDRTVTAQEALSQVR---KALAGIP 644
                     F++   +F G  G  +G   + L+ W  R        + VR   KA + I 
Sbjct: 600  NEKANVESVFTVNGFSFSGQ-GQNSGIAFVSLKPWEARPGAENSVEAIVRRATKAFSQIK 658

Query: 645  DVRVFPFMPGFRGGSNEPVQFVLG---GSDY---SELKTWAEKLEEEAEKSPFMTGADID 698
            D  VFPF        N P    LG   G D+    +      +L +   +   M  A  D
Sbjct: 659  DGLVFPF--------NLPAIIELGTATGFDFELIDQANLGHTQLTQARNQLLGMVKAHPD 710

Query: 699  Y--------SEKTPELVVTIDKQRAAELGISVKSISDTLEVMLGGKKVTTFVERGEEYDV 750
                      E TP+  + +D+++A  LG+S+  ++ T+   LGG  V  F++ G    V
Sbjct: 711  LLVRVRPNGLEDTPQFKLDVDQEKAQALGVSLSDVNQTISTALGGTYVNDFIDHGRVKKV 770

Query: 751  YLRGDENSFNNAADLSQIYMRTATGELVTLDTVTRIDEVASAIRLAHYNKQKSVTITANL 810
            Y++ D +      D++ +Y+R+A GE+V   + +    V  + RL  YN   S+ I    
Sbjct: 771  YVQADAHFRMLPGDINNLYVRSANGEMVPFSSFSSSHWVYGSPRLERYNGMPSMEILGES 830

Query: 811  EAGYTLGQALDFLDQKAQEILPNDISVSYSGESKDFKENQSSVAIVFALALLVAYLVLAA 870
              G + G+A+  ++  A + LP+ I   ++G S   + + +    ++A++L+V +L LAA
Sbjct: 831  APGKSTGEAMALMENLAAK-LPSGIGHDWTGMSYQERLSGNQAPALYAISLIVVFLCLAA 889

Query: 871  QFESFINPLVVMLTVPMGVFGGFLGLFVMGQGMNIYSQIGMIMLIGMVTKNGILIVEFAN 930
             +ES+  P  VML VP+GV G  L   + G   ++Y Q+G++  IG+  KN ILIVEFA 
Sbjct: 890  LYESWSIPFSVMLVVPLGVTGALLAASIRGLNNDVYFQVGLLTTIGLSAKNAILIVEFAK 949

Query: 931  QLRDR-GVEFEKAIIDASARRLRPILMTAFTTLAGSIPLIVSTGAGYESRIAVGTVIFFG 989
             L D+ G    +A ++AS  RLRPILMT+   + G +PL++S GAG  ++ AVGT +  G
Sbjct: 950  DLMDKEGKGIIEATLEASRMRLRPILMTSLAFILGVMPLVISRGAGSGAQNAVGTGVMGG 1009

Query: 990  MGFATLVTLLVIPAMYRLI 1008
            M  ATL+ +  +P  + ++
Sbjct: 1010 MLSATLLAIFFVPVFFVVV 1028