Pairwise Alignments

Query, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1046 a.a., multidrug resistance protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  499 bits (1284), Expect = e-145
 Identities = 320/1047 (30%), Positives = 532/1047 (50%), Gaps = 45/1047 (4%)

Query: 8    VKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIESQITSVL 67
            + RP+ A V+S+++ + G ++   L + + PDI  P V V   Y GAS  ++ + + + L
Sbjct: 7    IMRPIFATVVSLVIILAGFMAMRGLPIAQYPDIIPPQVEVEATYSGASPEVVAATVAAPL 66

Query: 68   EDQLAGISGIDEITSVSRN-GMSRITVTFELGYDLNTGVSDIRDAVARAQRSLPEEADDP 126
            E Q+ G+  +  I S S + G   + VTFE+G D +    ++ + V  A   LPE+    
Sbjct: 67   EQQINGVDNMLYINSTSSSTGTMNLMVTFEVGTDPDQATINVNNRVQAALPQLPEDVRRR 126

Query: 127  QVFKNNGSGQASVYINLSSSE--MDRTQLTDYIERVLLDRFSLISGVSSVDVSGGLYKVM 184
             V     S      I+++S +   D   +++Y    ++D    + GV  V +       M
Sbjct: 127  GVTVTKKSSNMLQVISMNSPDERYDTIYISNYALVNVIDELRRLKGVGDVVLFTAQDYSM 186

Query: 185  YVRIKPELMAGRGVATSDISDALNKENLESPGGQVRND------STVMSVRTARGYQSAE 238
             V ++P+ MA   +  SD+  A+ ++N +   G++              V T     + E
Sbjct: 187  RVWLQPDKMAQLRLTPSDVIGAIQEQNAQFAAGRIGQQPLHDPVELTFMVNTKGRLSTPE 246

Query: 239  DFEYLVVKRASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAK 298
            +FE ++++   DG+ + LK VA V +GA++ N   K +G   V +GI     AN LE A 
Sbjct: 247  EFENIILRVEEDGSTLKLKSVARVELGAKDYNFMGKENGKPTVPIGIFLAPGANALETAD 306

Query: 299  RVHEEVDKVQQFLPKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQLRA 358
            RV   + ++    P G   +I YD+T F+  SI EV  TLF    LV +V+Y+F+   RA
Sbjct: 307  RVSAAMAEMSLRFPDGVSYSIPYDTTKFVRVSIDEVVKTLFEAMVLVFIVIYLFLQNWRA 366

Query: 359  TLIPAVTVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIERGE 418
            T+IP + VPVS+I AF   Y  GF+IN +TL  L+L+IGLVVDDAI+V+EN+   +    
Sbjct: 367  TIIPCLAVPVSVIGAFAGMYMLGFTINTLTLFGLVLAIGLVVDDAIIVLENVERIMAEEH 426

Query: 419  KPLL-AAYKGTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFSSLI 477
             P+  A  K   EV   ++AT LVL  VF+P++F  G+ G ++ +F++ +A+++  S L+
Sbjct: 427  LPVKQATIKAMHEVASPIVATVLVLCAVFIPVAFAGGLAGQMYKQFAITIAVSMAISGLV 486

Query: 478  ALTLTPVLGSKLLK-ANVKPGRFNQLIDRLFARLESGYRQVVSRAIRWRWAAPVVIAACI 536
            ALTL+P L +  LK  + +P RF +  +  F  + + Y   V+  ++      V+ A   
Sbjct: 487  ALTLSPALCAMFLKPGHQEPNRFFRWFNNWFEGVTNRYTAGVTFLLKRMALGLVLFAGLC 546

Query: 537  GGSYGLMQLVPAQLTPSEDRGVIFSFVRGADATSYNRM---------AANMDLVEQRLMP 587
            G ++ L  +VP  L P ED+G + +     D ++ NR          AA+ D   Q +M 
Sbjct: 547  GVTWHLFSIVPGGLVPDEDQGYVMAMAILPDGSALNRTEVVTDRLAKAASNDSSVQSVMA 606

Query: 588  LLGQGFLKSFSIQSPAFGGNAGDQTGFVIMILEDWNDRTVTAQEALSQVRKAL---AGIP 644
              G            A  G     TGF  ++L+ W +R   ++ + S V++     AG  
Sbjct: 607  FTGYD----------AVSGTNKPNTGFSWIMLKPWEERKEESESSYSVVQRIFREGAGYT 656

Query: 645  DVRVFPFMPGFRGGSNEPVQFVL-----GGSDYSELKTWAEKLEEEAEKSPFMTGADIDY 699
            +  V  F P    G +    F +     G  D  EL    +K    A+K P + G    +
Sbjct: 657  EGVVIAFNPPPISGMSTTGGFEVYLQNRGTGDSKELAAMVQKFVGAAQKRPELAGVSSTF 716

Query: 700  SEKTPELVVTIDKQRAAELGISVKSISDTLEVMLGGKKVTTFVERGEEYDVYLRGDENSF 759
               TP+L V +D+ RA  LG+S+  +  T++   G   V  F + G  + V ++ D    
Sbjct: 717  GANTPQLFVELDRNRAKALGVSINELFATMQSTFGTYYVNDFNKFGRTFMVMVQADAQYR 776

Query: 760  NNAADLSQIYMRTATGELVTLDTVTRIDEVASAIRLAHYNKQKSVTITANLEAGYTLGQA 819
            +N  DL+++Y+R+  G+++ L ++ +++ +     +  +N   +  I      GY+ GQA
Sbjct: 777  DNPDDLTKVYVRSNKGDMIPLASLIKVERITGTEVVERFNVFPAAKIVGGPAPGYSSGQA 836

Query: 820  LDFLDQKAQEILPNDISVSYSGESKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPL 879
            L  +++ A E+LP + S+ + G +   +    +  +VFAL L++ +L+LAAQ+E +  PL
Sbjct: 837  LAVMEELAAEVLPAEYSLGWIGSAYQERLTGGTSFMVFALGLVMVFLILAAQYEKWSLPL 896

Query: 880  VVMLTVPMGVFGGFLGLFVMGQGMNIYSQIGMIMLIGMVTKNGILIVEFANQLRDRGVEF 939
             V++ VP  +FG     ++ G   ++Y Q+ ++ LIG+  KN ILIVEFA      G   
Sbjct: 897  AVIMIVPFALFGAMAATWLRGLDNDVYLQVSLVTLIGLAAKNAILIVEFAMMQVHEGKGI 956

Query: 940  EKAIIDASARRLRPILMTAFTTLAGSIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLL 999
             +++ +A+  R RPI+MT+   + G +PL +S+GAG   R A+GT I  GM  AT +   
Sbjct: 957  VESVTEAARLRFRPIIMTSMAFVLGCVPLAISSGAGAAGRHAIGTGIIGGMLAATFIATF 1016

Query: 1000 VIPAMYRLI-------SGSTQAPGHVE 1019
             IP  +RLI       +G  QA G  E
Sbjct: 1017 FIPLFFRLIMELSARFTGGHQASGDGE 1043