Pairwise Alignments

Query, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1070 a.a., multidrug resistance protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  468 bits (1203), Expect = e-135
 Identities = 310/1025 (30%), Positives = 515/1025 (50%), Gaps = 28/1025 (2%)

Query: 8    VKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIESQITSVL 67
            + RPV A V+++++ + G +S   L V + P I    V++S  Y GASA  +E  +T V+
Sbjct: 6    IDRPVFAWVIAIIIMLAGALSILSLPVSQYPKIAPTSVNISASYPGASAKTVEDTVTQVI 65

Query: 68   EDQLAGISGIDEITSVS-RNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLPEEADDP 126
            E ++ GI  +  ++S S   G   IT+TF+   D +     +++ +A A   LPE     
Sbjct: 66   EQKMKGIDSLRYMSSTSDATGQVSITLTFDASTDPDIAQVQVQNKLALATPMLPEAVQRQ 125

Query: 127  QVFKNNGSGQASVYINLSSSEMDRT--QLTDYIERVLLDRFSLISGVSSVDVSGGLYKVM 184
             +  N  +    + I L+S +   T   L+DY    LLD  S + GV    + G  Y  M
Sbjct: 126  GITVNKSTSSFLMIIALASDDPSLTGRDLSDYAATYLLDPISRVDGVGETQLFGAQY-AM 184

Query: 185  YVRIKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTV------MSVRTARGYQSAE 238
             V + P  +    +  +D+  A+  +N +   GQ+     V       ++ +    Q+ E
Sbjct: 185  RVWLDPHKLMNYRMTPADVRSAITAQNTQISVGQIGGTPAVPGQGMSFTILSQSLLQTRE 244

Query: 239  DFEYLVVKRASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAK 298
             FE +V++   DG+ + L DVA V +G+EN ++    +G  +  + I   + AN L+  K
Sbjct: 245  QFERIVLRVEQDGSTVRLADVARVELGSENYDAVSHFNGKPSTGIAIKLATGANALDTVK 304

Query: 299  RVHEEVDKVQQFLPKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQLRA 358
            RV   ++ + + LP+G R    YD+T F+  SI EV  TL     LV LV+Y+F+  +RA
Sbjct: 305  RVRTTMEGLAKNLPEGIRCVFPYDTTPFVRVSIEEVVKTLAEAIVLVFLVMYLFLQNIRA 364

Query: 359  TLIPAVTVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHI-ERG 417
            T+IP + VPV L+  F A   FGFSIN++T+  ++L+IGL+VDDAIVVVEN+   + E G
Sbjct: 365  TIIPTIAVPVVLLGTFGALAAFGFSINMLTMFGVVLAIGLLVDDAIVVVENVERIMTEEG 424

Query: 418  EKPLLAAYKGTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFSSLI 477
              P  A  K   E+  A++   LVL  VF+P++F+ G  G+++ +FS+ +  A+  S ++
Sbjct: 425  LPPREATRKSMGEITGALVGIALVLSAVFIPMAFIKGSSGVIYRQFSLTIVSAMTLSVVV 484

Query: 478  ALTLTPVLGSKLLKANVK-----PGRFNQLIDRLFARLESGYRQVVSRAIRWRWAAPVVI 532
            AL LTP L +  LK   K      G F    +R+F R   GYR+ V+           + 
Sbjct: 485  ALVLTPALCATFLKPLHKHEHQAQGGFFGWFNRMFDRTSRGYRKQVTGVTGRVGRTMCIY 544

Query: 533  AACIGGSYGLMQLVPAQLTPSEDRGVIFSFVRGADATSYNRMAANMDLVEQRLMPLLGQG 592
            A  + G+  L   +P    P ED+GVIFS V+    +   +    +  +E   +    + 
Sbjct: 545  ALLLAGTAFLFMRLPTSFLPEEDQGVIFSLVQLPTGSPQEKTLEVLKKLEHHYLVDEKET 604

Query: 593  FLKSFSIQSPAFGGNAGDQTGFVIMILEDWNDRTVTAQEALSQVRKALAGIPDVR---VF 649
                F++   +F G  G   G   + L+ W++R      A +   +A+     +R   V+
Sbjct: 605  VNSLFTVAGFSFAGR-GQNAGLAFVQLKPWDERKGEGMSAAAVAGRAMRAFSRIRNSVVY 663

Query: 650  PFMP------GFRGGSNEPVQFVLGGSDYSELKTWAEKLEEEAEKSPFMTGADIDYSEKT 703
             F P      G   G N  +Q    G  +  L     +L   A ++P +     +  E T
Sbjct: 664  AFTPPAVQELGNASGFNLFLQ-DREGVGHEALMQARNQLLGMAAQNPAIAVLRPNGMEDT 722

Query: 704  PELVVTIDKQRAAELGISVKSISDTLEVMLGGKKVTTFVERGEEYDVYLRGDENSFNNAA 763
            P+  + +D  +A   G+++  ++  L   LGG  V  F++RG    VYL+GD        
Sbjct: 723  PQFRIDVDAAKAGAHGLTMADVNGVLSTALGGAYVNDFIDRGRVKKVYLQGDAPFRMMPE 782

Query: 764  DLSQIYMRTATGELVTLDTVTRIDEVASAIRLAHYNKQKSVTITANLEAGYTLGQALDFL 823
            D++  ++R A G +V     +       + RL  YN   +V +  +   G + G+A+  +
Sbjct: 783  DINAWHVRNAQGNMVPFSAFSTASWTYGSPRLERYNGLPAVELVGSAAPGKSTGEAMQAV 842

Query: 824  DQKAQEILPNDISVSYSGESKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPLVVML 883
            +  A + LP  + +S++G S   + + S    ++A+++LV +L LAA +ES+  P  V+L
Sbjct: 843  EDMAAK-LPPGVGISWTGLSYQERMSGSQAPALYAISILVVFLCLAALYESWSVPTAVIL 901

Query: 884  TVPMGVFGGFLGLFVMGQGMNIYSQIGMIMLIGMVTKNGILIVEFANQLRDRGVEFEKAI 943
             VP+G+ G  +     G   +++ Q+G++  IG+  KN ILIVEFA  L   G     A 
Sbjct: 902  VVPLGIIGALMATLGRGLNNDVFFQVGLLTTIGLAAKNAILIVEFAMHLVKSGRPLLDAT 961

Query: 944  IDASARRLRPILMTAFTTLAGSIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLLVIPA 1003
             +A+  RLRPILMT+   L G +P+ +STGAG  S+ A+GT +  GM  AT++ +  +P 
Sbjct: 962  AEAARLRLRPILMTSLAFLLGVLPMAISTGAGSGSQRAIGTGVMGGMFSATVLAVYFVPV 1021

Query: 1004 MYRLI 1008
             + ++
Sbjct: 1022 FFVMV 1026