Pairwise Alignments

Query, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1029 a.a., acriflavin resistance protein (RefSeq) from Shewanella sp. ANA-3

 Score =  550 bits (1418), Expect = e-160
 Identities = 342/1020 (33%), Positives = 559/1020 (54%), Gaps = 22/1020 (2%)

Query: 1    MWLSDVSVKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIE 60
            M  +D+ ++RPV A  +S LL + G  +   + VRE P + + VV+VST Y GA A +I+
Sbjct: 1    MRFTDIFIRRPVLAASISFLLLLLGFNALNSMQVREYPKMTNTVVTVSTSYYGADANLIQ 60

Query: 61   SQITSVLEDQLAGISGIDEITSVSRNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLP 120
              IT  LE  LA    +D +TS S  G S+I+V  +L  D N  ++DI   V   +  LP
Sbjct: 61   GFITQPLEQALAQADNVDFMTSESFLGTSKISVYMKLNTDPNGALADILAKVNSVRSQLP 120

Query: 121  EEADDPQVFKNNGSGQASVYINLSSSEMDRTQLTDYIERVLLDRFSLISGVSSVDVSGGL 180
            +EA+DP V  + GS  + +YI+  S +++ +QLTDY+ERV+  +   I GV+ V++ GG+
Sbjct: 121  KEAEDPSVEMSTGSQTSVLYISFFSDQINSSQLTDYLERVVKPQLFTIDGVAKVNLYGGI 180

Query: 181  YKVMYVRIKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTVMSVRTARGYQSAEDF 240
               M + + P  M    +++SD+   L   N +S  GQ     T+ +        + E+ 
Sbjct: 181  KYAMRIWLDPARMGAFKLSSSDVMQVLQANNYQSAVGQTNGVYTLFNGTADTQVATIEEL 240

Query: 241  EYLVVKRASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAKRV 300
            + LV+  + DG  + L D+ADV +   ++     ++G   V +G+     ANPL VA   
Sbjct: 241  KRLVIG-SKDGLVVRLGDIADVSLEKSHDIYRALANGKEAVVIGLDVTPTANPLNVAADT 299

Query: 301  HEEVDKVQQFLPKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQLRATL 360
               + ++++ LP     +I YDS++ I+ SI EV  T+     +VI+V+ +F+G LRA +
Sbjct: 300  RALLPEIERNLPPSIGSSILYDSSLAIDESIKEVVKTIGEAAIIVIVVITLFLGSLRAVV 359

Query: 361  IPAVTVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIERGEKP 420
            IP VT+P+SLI   +    FGF++NL+TL+A++L+IGLVVDDAIVVVEN+  HI+ GE P
Sbjct: 360  IPIVTIPLSLIGVAIIMQMFGFTLNLMTLLAMVLAIGLVVDDAIVVVENVDRHIKLGESP 419

Query: 421  LLAAYKGTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFSSLIALT 480
              AA  GTRE+   VI+ T+ L  V+ PI+ M G+ G LF EF++ LA +V  S ++ALT
Sbjct: 420  FRAAIIGTREIAVPVISMTITLAAVYAPIALMGGITGSLFKEFALTLAGSVFISGIVALT 479

Query: 481  LTPVLGSKLLKANVKPGRFNQLIDRLFARLESGYRQVVSRAIRWRWAAPVVIAACI---G 537
            L+P++ +K+LK +  P RF   ++     L   Y  ++   +  R   PV++A  I    
Sbjct: 480  LSPMMCAKILKPHTTPNRFEMGVENFLTGLTRRYSNMLDAVMLHR---PVIVAFAIIVFA 536

Query: 538  GSYGLMQLVPAQLTPSEDRGVIFSFVRGADATSYNRMAANMDLVEQRLMPLLGQGFLKSF 597
                L + +P++L P+ED+GV+          + + + ANM LV   +         +  
Sbjct: 537  SLPVLFKFIPSELAPNEDKGVVMMMGTAPSTANLDYIQANMGLVTDMIK-------AQPE 589

Query: 598  SIQSPAFGGNAGDQTGFVIMILEDWNDRTVTAQEALSQVRKALAGIPDVRVFPF-MPGFR 656
            S  S AF G       F I  L  W++R  + ++      K +  IP + +  F MP   
Sbjct: 590  SAASLAFVGVPSSSQAFGIAPLVPWSEREKSQKQMQEFFAKEVKHIPGMAITTFQMPELP 649

Query: 657  GGSNE-PVQFVLGGSD-YSELKTWAEKLEEEAEKSPFMTGADIDYSEKTPELVVTIDKQR 714
            G S+  P+QFV+  S+ ++ L      + E+ +KSP    ++I+    +  + + I +  
Sbjct: 650  GASSGLPIQFVITTSNSFASLFQIGTGVLEKVQKSPLFVYSEINLKFDSGTMKLHIKRDL 709

Query: 715  AAELGISVKSISDTLEVMLGGKKVTTFVERGEEYDVYLRGDENSFNNAADLSQIYMRTAT 774
            A   G++++ I  TL  M+    V      G  Y+V  + +     N   L+  Y++ A 
Sbjct: 710  AGTYGVTMQDIGITLATMMSDGYVNRINLDGRSYEVIPQVERKLRANPESLANYYVKAAD 769

Query: 775  GELVTLDTVTRIDEVASAIRLAHYNKQKSVTITANLEAGYTLGQALDFLDQKAQEILPND 834
            G+ + L ++  I+ VA    L H+N+  ++T+      G  +G A++FL       LP  
Sbjct: 770  GKSIPLSSLVDIEMVAEPRSLPHFNQMNALTVGGVAAPGVAIGDAINFLQNIGDNELPKG 829

Query: 835  ISVSYSGESKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPLVVMLTVPMGVFGGFL 894
             S  + GE++ F    S++   F LA+ + +LVLA+QFES  +PLV++++VP+ + G  +
Sbjct: 830  YSYDFLGEARQFVTEGSALYATFLLAIAIIFLVLASQFESLKDPLVILVSVPLAISGALI 889

Query: 895  GL---FVMGQG-MNIYSQIGMIMLIGMVTKNGILIVEFANQLR-DRGVEFEKAIIDASAR 949
             L    V G   +NIY+Q+G+I L+G++TK+GIL+ E A + +  RG+   +AI  A+  
Sbjct: 890  VLGWTHVFGLAKINIYTQVGLITLVGLITKHGILMCEVAKEEQLHRGLSKLEAIKLAATI 949

Query: 950  RLRPILMTAFTTLAGSIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLLVIPAMYRLIS 1009
            RLRPILMT    +AG +PL+ ++GAG  +R  +G VI  G+   T+ TL V+P +Y  ++
Sbjct: 950  RLRPILMTTAAMIAGLLPLLFASGAGAVARFNIGIVIVAGLSIGTIFTLFVLPVIYTYLA 1009