Pairwise Alignments

Query, 352 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 380 a.a., secretion protein HylD from Azospirillum brasilense Sp245

 Score =  130 bits (326), Expect = 7e-35
 Identities = 97/360 (26%), Positives = 175/360 (48%), Gaps = 30/360 (8%)

Query: 7   LSLTLLTLLMNSAVLSAKEPNQPPAISVVTESVQSQQISQSLSVVGKLKAEQSVDIAAEV 66
           L+++ L +L+ S  + A++P   P+ +V+TE V+ + ++ + + +G+++A Q  +  A V
Sbjct: 8   LAVSCLLVLLPSGAVLAQQPANAPSPTVMTEVVRERDVTPTSAFIGRVQAIQDFEARARV 67

Query: 67  AGKVDMIAVQANQQVKKGQILIKLDDDKAQAALVEAKAYLQDEQRKLTEYER-------L 119
            G V+ +A Q  Q V K  +L  ++    QAA+  AKA L   Q  L E +R       L
Sbjct: 68  EGFVEQVAFQEGQNVTKDTLLYVIEQAPYQAAVDSAKADLARAQATLREAQRAFQRAQEL 127

Query: 120 LKRNAITPTEIDAQRARVEIG-------QARLNAAQANLADLHITAPFDGTVGFIDFSRG 172
             R  I+  ++D  +A  E         QA+L  A+ NL    I++P DG +G    + G
Sbjct: 128 RTRGNISQADLDQAQAAQETADADIMQTQAKLRQAELNLGYTRISSPIDGRIGATAMTVG 187

Query: 173 KWVSAGS-ELLTLDNLSLMRLDLQIPERYLPQLSKGMKVQGSSEA------------WPN 219
             V+  S  L T+  L  +R+   + +R + ++ +      S++A               
Sbjct: 188 DLVNPSSGPLATVVQLDPIRVVFSVSDRDILEVQRAAPDLASADAVNRFVPALRLADGSE 247

Query: 220 VQFEGSVVAVDSRINQETLNLRVRVHFPNPDQRLKPGMLMSARIHFPAIS--APIIPVQA 277
            + +G V    +RI+ +T  + V   F NP   L PG  ++  I  PA +   P++PV A
Sbjct: 248 YEQKGKVSFASNRIDPQTGTIPVYADFANPKGFLLPGQYVTVLIR-PAQTERQPVVPVSA 306

Query: 278 LEYSGTKRFVYVIGEDNVAKRREVSLGARVENQVVIEKGLQIGEKIVVQGIVNMRDNARV 337
           ++      +V V+ + N A+RR +  G +++  + + KG+Q GE ++V G   +R    V
Sbjct: 307 IQQDQQGSYVLVLDQQNRAQRRPIEPGPQLDQVIAVPKGVQAGETVIVGGAQKVRPGMAV 366