Pairwise Alignments

Query, 352 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 361 a.a., Membrane fusion protein of RND family multidrug efflux pump from Xanthomonas campestris pv. campestris strain 8004

 Score =  199 bits (505), Expect = 1e-55
 Identities = 107/327 (32%), Positives = 183/327 (55%)

Query: 11  LLTLLMNSAVLSAKEPNQPPAISVVTESVQSQQISQSLSVVGKLKAEQSVDIAAEVAGKV 70
           LL + + S       P     I VV ++V  Q  + ++  +  ++A +SV + A V+  V
Sbjct: 14  LLAVGLTSCARQTSAPAASKPIPVVVQAVSVQPWNSTVQSIATVRARESVALTAAVSDVV 73

Query: 71  DMIAVQANQQVKKGQILIKLDDDKAQAALVEAKAYLQDEQRKLTEYERLLKRNAITPTEI 130
           + +   +  +VK GQ+L++L  +  QAAL  A+A  ++ ++       L+ +  +  + +
Sbjct: 74  EQVNFDSGDEVKAGQLLLRLRGNSQQAALTAAQATFEETEQLYRRQLSLVGQQLVAKSTV 133

Query: 131 DAQRARVEIGQARLNAAQANLADLHITAPFDGTVGFIDFSRGKWVSAGSELLTLDNLSLM 190
           D QRA  +  +AR+   +A + D  + APF G +G    S G  ++A + + TLD++  M
Sbjct: 134 DTQRALRDAAEARVQQMRAEITDREVRAPFSGVLGIRQVSPGSLITASTVITTLDDVERM 193

Query: 191 RLDLQIPERYLPQLSKGMKVQGSSEAWPNVQFEGSVVAVDSRINQETLNLRVRVHFPNPD 250
            +D Q+PE  L  +  G  V GS+ A+P  QFEG V A+DSRI++ T ++ VR  FPN D
Sbjct: 194 YVDFQVPESQLGLVELGNAVNGSAAAYPGAQFEGEVAAIDSRIDETTRSVTVRADFPNDD 253

Query: 251 QRLKPGMLMSARIHFPAISAPIIPVQALEYSGTKRFVYVIGEDNVAKRREVSLGARVENQ 310
           +RL+PGML+  R+  PA  A +IP  A+   G + +V+ +  D+  +R +V LG R + +
Sbjct: 254 RRLRPGMLLDVRLFQPARQALVIPEIAVVQVGRESYVFRVKPDSSVERADVRLGERRDGK 313

Query: 311 VVIEKGLQIGEKIVVQGIVNMRDNARV 337
           V I +G++ GE+IVV G   +R   ++
Sbjct: 314 VEILEGVKAGERIVVDGAGKLRPGLKI 340