Pairwise Alignments

Query, 352 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., efflux transporter, RND family, MFP subunit from Marinobacter adhaerens HP15

 Score =  202 bits (514), Expect = 1e-56
 Identities = 118/345 (34%), Positives = 198/345 (57%), Gaps = 9/345 (2%)

Query: 1   MNKNTVLSLTLLTLLMNSAVL--------SAKEPNQPPAISVVTESVQSQQISQSLSVVG 52
           M K  +++L L+ + +  A +        +A+   + PA +V T   Q + +   ++ VG
Sbjct: 1   MWKQWLIALVLVAVAIGGAFVYQNFDDGTAAQSGRERPASAVNTMLPQMEAVRDVVNAVG 60

Query: 53  KLKAEQSVDIAAEVAGKVDMIAVQANQQVKKGQILIKLDDDKAQAALVEAKAYLQDEQRK 112
            LKA  +V++  EV+G+V  + ++  ++V +G +L++LDD +A A L   +A L D +R+
Sbjct: 61  SLKALNAVELTTEVSGRVVELNLETGRRVGQGDVLLRLDDRQAWADLQVIEAQLADARRQ 120

Query: 113 LTEYERLLKRNAITPTEIDAQRARVEIGQARLNAAQANLADLHITAPFDGTVGFIDFSRG 172
           L   +RL   N+I+ +++D  R  V++ +A+  +AQ  L +  I APF G VG  D S G
Sbjct: 121 LERAQRLRSNNSISQSQVDQLRTSVDVAEAQRQSAQVRLENHRIEAPFAGVVGLSDISVG 180

Query: 173 KWVSAGSELLTLDNLSLMRLDLQIPERYLPQLSKGMKVQGSSEAWPNVQFEGSVVAVDSR 232
            +++AG+ + TLD    M L   IPER+L Q+S G +V+G+S A+P+  F G +V + SR
Sbjct: 181 AYITAGTSVTTLDTTDRMELGFSIPERFLGQVSLGQEVRGASPAYPDQTFSGQLVELGSR 240

Query: 233 INQETLNLRVRVHFPNPDQRLKPGMLMSARIHFPAISAPIIPVQALEYSGTKRFVYVIGE 292
           +++ + +L VR    NPD  L+PG  MSA +      A +IP QA+   G +++V+V  E
Sbjct: 241 VSELSRSLPVRALIDNPDGLLRPGQFMSATLTLRQRQALVIPEQAVMIRGDEQYVFV-AE 299

Query: 293 DNVAKRREVSLGARVENQVVIEKGLQIGEKIVVQGIVNMRDNARV 337
           D VA+R  VSLG+R+   V +  GL   + ++V G   +    RV
Sbjct: 300 DGVARRVSVSLGSRMPGFVEVSSGLSQEDPVIVTGQDRLSSGDRV 344