Pairwise Alignments

Query, 352 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 366 a.a., efflux transporter, RND family, MFP subunit from Marinobacter adhaerens HP15

 Score =  166 bits (420), Expect = 9e-46
 Identities = 96/319 (30%), Positives = 175/319 (54%), Gaps = 7/319 (2%)

Query: 25  EPNQPPAISVVTESVQSQQISQSLSVVGKLKAEQSVDIAAEVAGKVDMIAVQANQQVKKG 84
           +P  P  IS V    Q++  + ++  VG ++A   + +A EV G ++ I  ++   VK+G
Sbjct: 38  QPQPPAQISAV--EAQNEAWTPAIKAVGSVEAINGIRVANEVPGVIEAINFESGDVVKQG 95

Query: 85  QILIKLDDDKAQAALVEAKAYLQDEQRKLTEYERLLKRNAITPTEIDAQRARVEIGQARL 144
            +LI++D    +AAL   +A  Q  +++      LL + A++ ++ D  +A  +  +AR+
Sbjct: 96  DVLIRIDAAIDEAALRTRRAEAQLAEQEFKRVSDLLPKRAVSQSQYDEAKANFDAARARV 155

Query: 145 NAAQANLADLHITAPFDGTVGFIDFSRGKWVSAGSELLTLDNLSLMRLDLQIPERYLPQL 204
           N A+A L+   I APFDGT+G     +G++++ G+ ++ ++ L  + +D  + E+ LP +
Sbjct: 156 NEAEAQLSKKIIRAPFDGTLGIRMVDQGEYIATGTPIVEINMLDPIYVDYTLSEKNLPNV 215

Query: 205 SKGMKVQGSSEAWPNVQFEGSVVAVDSRINQETLNLRVRVHFPNPDQRLKPGMLMSARIH 264
           + G  V  +  A P   FEGSV A+++ +N ET  +RVR    NPD  L+PGM  +    
Sbjct: 216 ATGYPVVATVAAVPEQDFEGSVSAINTSVNPETRTVRVRATLSNPDNLLRPGMFATVLTQ 275

Query: 265 FPAISAPI-IPVQALEYSGTKRFVYVIGEDN----VAKRREVSLGARVENQVVIEKGLQI 319
            P  +  + +P  A+ Y+    FV+V+ E++    V  RR V+ G     +V +  GL+ 
Sbjct: 276 QPEDNEVVTVPRTAISYNTYGDFVFVVEENDDGNLVVNRRTVTTGETRNTRVAVLSGLEA 335

Query: 320 GEKIVVQGIVNMRDNARVS 338
           GE +V +G++ +R   +V+
Sbjct: 336 GETVVEKGLLRLRAGQKVA 354