Pairwise Alignments

Query, 352 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., multidrug transporter subunit MdtA from Klebsiella michiganensis M5al

 Score =  127 bits (320), Expect = 4e-34
 Identities = 90/333 (27%), Positives = 163/333 (48%), Gaps = 23/333 (6%)

Query: 34  VVTESVQSQQISQSLSVVGKLKAEQSVDIAAEVAGKVDMIAVQANQQVKKGQILIKLDDD 93
           V   +  S+ + + LS +G + A  +V + + V G++  I     QQVK G +L ++D  
Sbjct: 59  VQAATAASEAVPRYLSGLGTVTAANTVTVRSRVDGQLLAIHFTEGQQVKAGDLLAEIDPS 118

Query: 94  KAQAALVEA-------KAYLQDEQRKLTEYERLLKRNAITPTEIDAQRARVEIGQARLNA 146
           + + AL +A       +A L + +R L  Y++L+K N ++  E+D Q++ V   Q  + A
Sbjct: 119 QFKVALAQAEGQLAKDRATLANARRDLARYQQLVKTNLVSRQELDTQQSLVSETQGTIKA 178

Query: 147 AQANLADLH-------ITAPFDGTVGFIDFSRGKWVSAGSE--LLTLDNLSLMRLDLQIP 197
            +A +A          ITAP DG VG      G  +S+G    ++ L     + +   +P
Sbjct: 179 DEAAVASAQLQLNWSRITAPIDGRVGLKQVDIGNQISSGDTTGIVVLTQTHPIDVVFTLP 238

Query: 198 ERYLPQLSKGMKVQGSS--EAWPNVQ----FEGSVVAVDSRINQETLNLRVRVHFPNPDQ 251
           E  +  + +  K       EAW         EGS++++D++I+  T  ++++  F N D 
Sbjct: 239 ENQIATVVQAQKAGKKLVVEAWDRTNKQKISEGSLLSLDNQIDATTGTIKLKARFTNLDD 298

Query: 252 RLKPGMLMSARIHFPAI-SAPIIPVQALEYSGTKRFVYVIGEDNVAKRREVSLGARVENQ 310
            L P   ++AR+      +A +IP  AL+      FV+V+ ++N   +  V+ G +   +
Sbjct: 299 ALFPNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNDENKVSKHTVTPGIQDSLK 358

Query: 311 VVIEKGLQIGEKIVVQGIVNMRDNARVSEVTVE 343
           VVI  GL  G+++V  GI  + + A+V  V  +
Sbjct: 359 VVINAGLSAGDRVVTDGIDRLTEGAKVEVVEAQ 391