Pairwise Alignments

Query, 352 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., Multidrug resistance protein MdtA from Enterobacter sp. TBS_079

 Score =  128 bits (321), Expect = 3e-34
 Identities = 96/362 (26%), Positives = 169/362 (46%), Gaps = 35/362 (9%)

Query: 23  AKEPNQPPAIS------------VVTESVQSQQISQSLSVVGKLKAEQSVDIAAEVAGKV 70
           A  P+Q PA              V   +  ++ + + LS +G + A  +V + + V G++
Sbjct: 37  ASSPSQRPASGGRHGMRGGALAPVQAATAVNKAVPRYLSGLGTITAANTVTVRSRVDGQL 96

Query: 71  DMIAVQANQQVKKGQILIKLDDDK-------AQAALVEAKAYLQDEQRKLTEYERLLKRN 123
             +  Q  QQVK G +L ++D  +       AQ  L + KA L + +R L  Y++L+K N
Sbjct: 97  MALHFQEGQQVKAGDLLAEIDPSQFKVTLAQAQGQLAKDKATLANARRDLARYQQLVKTN 156

Query: 124 AITPTEIDAQRARVEIGQARLNAAQANLADLH-------ITAPFDGTVGFIDFSRGKWVS 176
            ++  E+D Q++ V      L A +A +A          ITAP DG VG      G  +S
Sbjct: 157 LVSRQELDTQQSLVSEALGTLKADEAAVASAQLQLDWSRITAPIDGRVGLKQVDIGNQIS 216

Query: 177 AGSE--LLTLDNLSLMRLDLQIPERYLPQLSKGMKVQGSS--EAWPNVQ----FEGSVVA 228
           +G    ++ +     + L   +PE  +  + +  K       EAW         EG++++
Sbjct: 217 SGDTTGIVVITQTHPVDLVFTLPESDIATVVQAQKAGKGLVVEAWDRTNKQKLSEGTLLS 276

Query: 229 VDSRINQETLNLRVRVHFPNPDQRLKPGMLMSARIHFPAI-SAPIIPVQALEYSGTKRFV 287
           +D++I+  T  ++++  F N D  L P   ++AR+      +A +IP  AL+      FV
Sbjct: 277 LDNQIDTTTGTIKLKARFNNQDDALFPNQFVNARMLVATQENAVVIPTAALQMGNEGNFV 336

Query: 288 YVIGEDNVAKRREVSLGARVENQVVIEKGLQIGEKIVVQGIVNMRDNARVSEVTVEGRPL 347
           +V+  +N   +  V  G +    VVI  GL  G+++V  GI  + + A+V  V  + +P 
Sbjct: 337 WVLNSENNVSKHLVKTGIQDSQTVVISAGLSAGDRVVTDGIDRLTEGAKVEVVEGQQQPA 396

Query: 348 KK 349
           K+
Sbjct: 397 KQ 398