Pairwise Alignments

Query, 352 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., Multidrug resistance protein MdtA from Enterobacter sp. TBS_079

 Score =  126 bits (317), Expect = 7e-34
 Identities = 93/342 (27%), Positives = 163/342 (47%), Gaps = 25/342 (7%)

Query: 20  VLSAKEPNQPPAISVVTESVQSQQISQSLSVVGKLKAEQSVDIAAEVAGKVDMIAVQANQ 79
           +L+  +P    AI V    V+    +    V G+++A  +V+I A   G +  +  +  Q
Sbjct: 9   LLALFQPAFAAAIPVRVAVVEQTPHAAERHVPGRIEAIHTVEIRARTEGVITQVHFRDGQ 68

Query: 80  QVKKGQILIKLDDDK-------AQAALVEAKAYLQDEQRKLTEYERLLKRNAITPTEIDA 132
            VKKG +L +LDD +       AQA +  A+A L+  Q++L+ +E L   NAI+  ++D 
Sbjct: 69  YVKKGDVLFELDDAEPRAAVRLAQAEVKSAEATLRQAQQQLSRFESLGNSNAISRHDVDN 128

Query: 133 QR-------ARVEIGQARLNAAQANLADLHITAPFDGTVGFIDFSRGKWVSAGSELLT-L 184
            R       A +E  +ARL      LA   IT+P DG VG   F  G  V+  S +L  +
Sbjct: 129 ARMQRDVASAALEQAKARLETRNVTLAYTRITSPIDGRVGHSQFHAGSLVNPSSGVLVDV 188

Query: 185 DNLSLMRLDLQIPE-RYLPQLSKGMKVQGSSEAWP------NVQFEGSVVAVDSRINQET 237
             L  +R+   + E  +  +  +   +     AW         +  G + +VD+RI+  T
Sbjct: 189 VQLDPIRIAFALEEGAFATKAGQHADISALKRAWQARIDSNGQRLSGELTSVDNRIDPRT 248

Query: 238 LNLRVRVHFPNPDQRLKPGMLMSARIHFPAISAPI--IPVQALEYSGTKRFVYVIGEDNV 295
            ++ +R  F NP  +L PG  ++  +  PA + P+  +P  A++ +G   F +V+  +  
Sbjct: 249 ASVMLRAEFANPRHQLLPGGNVNVYLR-PASAQPVLTVPAAAVQQNGEGFFAWVVNAEGK 307

Query: 296 AKRREVSLGARVENQVVIEKGLQIGEKIVVQGIVNMRDNARV 337
           A++R + +  ++  Q  I  GL  GE+ +  G   ++  A V
Sbjct: 308 AEKRPLKIAGQIGQQFEISSGLHPGERAITDGAQRVQPGAAV 349