Pairwise Alignments

Query, 562 a.a., alpha,alpha-phosphotrehalase from Vibrio cholerae E7946 ATCC 55056

Subject, 1100 a.a., Alpha amylase, catalytic region (NCBI) from Rhodospirillum rubrum S1H

 Score =  248 bits (632), Expect = 1e-69
 Identities = 159/533 (29%), Positives = 252/533 (47%), Gaps = 80/533 (15%)

Query: 10  WWKTAAIYQIYPKSFCDSGAKGVGDLQGIISKLDYLQKLGIEAIWLTPIYQSPMVDNGYD 69
           W+K A +YQ++ K+F DS   G GD +G+  KLDYL  LG+ A+W+ P Y SP+ D+GYD
Sbjct: 6   WYKDAIVYQLHVKAFFDSNGDGFGDFKGLTEKLDYLSDLGVTAVWILPFYPSPLRDDGYD 65

Query: 70  IADYYAINPDFGTMQDFEQLLKEAHRRGMRIIMDIVVNHTSTEHAWFQSALGDR-NSPYR 128
           IADY AI+  +GTM DF + ++EAH RG+++I ++V+NHTS +HAWFQ A   +  S  R
Sbjct: 66  IADYKAIHRAYGTMGDFRRFVREAHERGLKVITELVINHTSDQHAWFQRAREAKPGSKAR 125

Query: 129 DYYIWRKPVNGGVPNN-WQSKFGGSAWALDEATGEYYLHLFAKEQADLNWENPQVREEVK 187
           D Y+W       +      +    S WA D     YY H F   Q DLNW+NP++ EE+ 
Sbjct: 126 DMYVWSDTDQRYLDTRIIFTDTETSNWAWDPLAKAYYWHRFFAHQPDLNWDNPRIFEEIT 185

Query: 188 NIIGFWAEKGVDGFRLDVINLISKQQDFTNDDIGDGRRFYTDGPRVHEYLQEISRDVFQR 247
            ++ FW + GVDG RLD I  + ++    N+++          P  H  L+ +   +   
Sbjct: 186 RVMKFWLDCGVDGMRLDAIPYLVERDGTNNENL----------PETHVVLKRLRAWLDAH 235

Query: 248 YGSVTVGEMSSTTLEHCQQYSALDGRELSMVFNFHHLKVDYPNGEKWTKAPFDFLQLKQ- 306
           Y        ++   E  ++Y    G E  M F+F  +   Y    +  + P   +  +  
Sbjct: 236 YEDRMFLAEANQWPEDVREYFGEAGDECHMAFHFPVMPRIYMAVAQEDRHPITDIMRQTP 295

Query: 307 -----------IFNHWQTGL-----NGKGWGALFWCNHDQPRI-------VSRLGDDQQY 343
                      + NH +  L       + +   F+ N  + RI       ++ L D+ + 
Sbjct: 296 EIPAACQWAIFLRNHDELTLEMVTDRERDYMNTFYANDSRARINVGIRRRLAPLLDNDRR 355

Query: 344 RVESAKMLAATIHLMQGTPYIYQGEEIGMTNPGFTSIKQYRDVESINIHQIMVQQQGVSE 403
           ++E   +L + +  M GTP IY G+EIGM +  F                          
Sbjct: 356 KIE---LLNSLLMSMPGTPIIYYGDEIGMGDNIFLG------------------------ 388

Query: 404 SDMLAILAQKSRDNSRTPMQWDASLNAGFTRGEP-------WIEVAHNYPEINAQAALED 456
                      RD  RTPMQW    N GF+R +P        ++  + +  +N +A    
Sbjct: 389 ----------DRDGVRTPMQWSPDRNGGFSRADPASLYLPTIMDAVYGFFAVNVEAQSRS 438

Query: 457 PHSVFYFYRRLLSLRKKVAVITDGDYTDLLPEHKEIFAYQRRNQKQVLICLNN 509
           P S+  + RRL+++RK+      G    L P +++I AY R  + +V++C+ N
Sbjct: 439 PSSLLNWMRRLIAVRKRHPSFGRGTLRFLYPGNRKILAYLREFEGEVILCVAN 491