Pairwise Alignments

Query, 562 a.a., alpha,alpha-phosphotrehalase from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., alpha amylase, catalytic region (RefSeq) from Shewanella loihica PV-4

 Score =  311 bits (798), Expect = 3e-89
 Identities = 186/526 (35%), Positives = 276/526 (52%), Gaps = 54/526 (10%)

Query: 8   MPWWKTAAIYQIYPKSFCDSGAKGVGDLQGIISKLDYLQKLGIEAIWLTPIYQSPMVDNG 67
           + WW+ A IYQIYP+S  DS   GVGDLQGIISKLDY+  L ++AIW++P ++SPM D G
Sbjct: 4   LSWWRGAVIYQIYPRSLMDSNGDGVGDLQGIISKLDYIASLNVDAIWISPFFKSPMKDFG 63

Query: 68  YDIADYYAINPDFGTMQDFEQLLKEAHRRGMRIIMDIVVNHTSTEHAWFQSALGDRNSPY 127
           YDI+DY AI+P FGTM DF++L+ +AH  G+++I+D V++HTS +HAWF  +   R++  
Sbjct: 64  YDISDYRAIDPLFGTMADFDELIDKAHGLGIKVIIDQVLSHTSDQHAWFSESRQSRDNAK 123

Query: 128 RDYYIWRKP-VNGGVPNNWQSKFGGSAWALDEATGEYYLHLFAKEQADLNWENPQVREEV 186
           +D+Y+W  P  +G  PNNW + FGG AW  +    +YYLH F   Q DLN+ NP VR+ V
Sbjct: 124 QDWYVWADPNPDGTAPNNWLAIFGGCAWEWEPRRQQYYLHNFLTSQPDLNFHNPDVRQAV 183

Query: 187 KNIIGFWAEKGVDGFRLDVINLISKQQDFTN-----DDIGDGRRFYTDGPRVHEY----- 236
            + + FW +KGVDGFRLD I      +   +     +D   GR F  D P  ++Y     
Sbjct: 184 LDNVKFWLDKGVDGFRLDAITFCYHDEQLRDNPPKPEDKRQGRGFSEDNPYAYQYHYYNN 243

Query: 237 --------LQEISRDVFQRYGSVTVGEMSS-TTLEHCQQYSALDGRELSMVFNFHHLKVD 287
                   ++E+   + Q  G VT+GE+SS  +L    +Y+  D R L M ++F  L  D
Sbjct: 244 TRPQTVGFIEELRALINQYPGVVTLGEVSSEDSLATMAEYTQGDDR-LHMAYSFELLTDD 302

Query: 288 YPNGEKWTKAPFDFLQLKQIFNHWQTGLNGKGWGALFWCNHDQPRIVSRLGDDQQYRVES 347
           +     + +   + L+             G GW      NHD  R+ +R G D  +  + 
Sbjct: 303 F--SPAYIRHTVEALEQS----------IGDGWPCWAIGNHDVQRVATRWGRD-AFNSDM 349

Query: 348 AKMLAATIHLMQGTPYIYQGEEIGMTNPGFTSIKQYRDVESINIHQIMVQQQGVSESDML 407
           AKML A +  ++G+   YQGEE+G+      + +Q +D   I    +             
Sbjct: 350 AKMLNAMLCSLRGSVCSYQGEELGLGEVEI-AYEQLQDPFGITFWPMF------------ 396

Query: 408 AILAQKSRDNSRTPMQWDASLN-AGFTRGEPWIEVAHNYPEINAQAALEDPHSVFYFYRR 466
                K RD  RTPM W    N AGF+   PW+ V  ++  +       +P S+   YR 
Sbjct: 397 -----KGRDGCRTPMPWRHDANHAGFSDNTPWLPVPADHKAVAVDVQEANPESILNHYRH 451

Query: 467 LLSLRKKVAVITDGDYTDLLPEHKEIFAYQRRNQKQVLICLNNYYG 512
           +L+ RK   ++  GD    +     +  ++RR  +Q L+   N  G
Sbjct: 452 MLAWRKLHPILVTGD-IKFIESTDALLVFERRLGEQTLLVAFNLSG 496