Pairwise Alignments

Query, 562 a.a., alpha,alpha-phosphotrehalase from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., oligo-1,6-glucosidase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  308 bits (790), Expect = 3e-88
 Identities = 186/524 (35%), Positives = 285/524 (54%), Gaps = 57/524 (10%)

Query: 8   MPWWKTAAIYQIYPKSFCDSGAKGVGDLQGIISKLDYLQKLGIEAIWLTPIYQSPMVDNG 67
           + WW+ A IYQIYP+S  D+   GVGDL+GII+KLDY+  L ++AIW++P ++SPM D G
Sbjct: 4   LTWWRGAVIYQIYPRSLLDTNGDGVGDLRGIITKLDYIASLNVDAIWISPFFKSPMADFG 63

Query: 68  YDIADYYAINPDFGTMQDFEQLLKEAHRRGMRIIMDIVVNHTSTEHAWFQSALGDRNSPY 127
           YDI+DY  I+P FG+MQDF++L+++AH+RG+++I+D V++HTS +HAWF  +   R +P 
Sbjct: 64  YDISDYREIDPLFGSMQDFDELIEKAHQRGIKVIIDQVLSHTSDQHAWFIESRESRTNPK 123

Query: 128 RDYYIWRKPVNGGVP-NNWQSKFGGSAWALDEATGEYYLHLFAKEQADLNWENPQVREEV 186
            D+Y+W  P   G P NNW + FGG AW  +    +YYLH F + Q D+N+ NP VR+ V
Sbjct: 124 ADWYVWADPREDGTPPNNWLAIFGGCAWEWEPRRQQYYLHNFLRSQPDINFHNPDVRQAV 183

Query: 187 KNIIGFWAEKGVDGFRLDVINLISKQQDFTND-----DIGDGRRFYTDGPRVHEY----- 236
            + + FW +KGVDGFRLD I      +   ++     +   GR F  D P  ++Y     
Sbjct: 184 LDNVEFWLKKGVDGFRLDAITFCFHDELLRDNPAKPKEKRQGRGFSEDNPYAYQYHYYNN 243

Query: 237 -------LQEISRDVFQRY-GSVTVGEMSST-TLEHCQQYSALDGRELSMVFNFHHLKVD 287
                    E  R +  RY G+VT+GE+S+  +L     Y+  D R L M ++F  L  D
Sbjct: 244 DRPQTIQFIEALRQLINRYPGTVTLGEVSAEDSLAVMAAYTKGDDR-LHMAYSFELLTDD 302

Query: 288 YPNGEKWTKAPFDFLQLKQIFNHWQTGLNGKGWGALFWCNHDQPRIVSRLGDDQQYRVES 347
           Y               ++Q     +  + G GW      NHD  R+ SR G  +Q   + 
Sbjct: 303 YSAA-----------YIRQTVEALENSI-GDGWPCWAIGNHDVQRVASRWGRGKQTS-DM 349

Query: 348 AKMLAATIHLMQGTPYIYQGEEIGMTNPGFTSIKQYRDVESINIHQIMVQQQGVSESDML 407
           AKML A +  ++G+   YQGEE+G+T               I  H++     G +   M 
Sbjct: 350 AKMLNAMLCSLRGSVCSYQGEELGLTEV------------PIEFHELQ-DPFGKTFWPMF 396

Query: 408 AILAQKSRDNSRTPMQWDASLN-AGFTRGEPWIEVAHNYPEINAQAALEDPHSVFYFYRR 466
                K RD  RTPM W+   + +GF++  PW+ +A  +  +       D HSV + YR+
Sbjct: 397 -----KGRDGCRTPMPWEQYADFSGFSQVSPWLPIAAAHRALAVDLQEADCHSVLHGYRQ 451

Query: 467 LLSLRK--KVAVITDGDYTDLLPEHKEIFAYQRRNQKQVLICLN 508
            L+ RK     + ++ ++ D  PE   +F  ++  ++++L+C N
Sbjct: 452 FLAWRKCYPALITSEIEFLD-APEPLLVFV-RKLGEQKLLVCFN 493