Pairwise Alignments

Query, 478 a.a., PTS trehalose transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., PTS system, glucose-specific IIBC component (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 49.7 bits (117), Expect = 2e-10
 Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 1/82 (1%)

Query: 1   MDEDMSKIAKQDVTRLIELVGGESNIASVTHCLTRLRFVLNQPEQADKAGLEALSMVKGC 60
           +  D +K +K+ +  +I  +GG  NI  +  CLTRLR  ++ PE  +K  L  L   KG 
Sbjct: 405 LQSDGTKGSKESLRAIIAALGGRDNIVELNACLTRLRLSVHSPELVNKVRLSQLG-AKGV 463

Query: 61  FTNAGQFQVVIGTEVDQVYKML 82
                  Q+V GT+ + + K+L
Sbjct: 464 IVMGKGVQIVYGTKAETLRKVL 485